RNA–Protein interactions for RNA: ENST00000566669.1

UBFD1-206, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-206ENST00000566669 SPATA31D3P0C874 917 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 RABEP1Q15276 862 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 RILPL1Q5EBL4 403 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 DCLRE1AQ6PJP8 1040 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 SPATA31D4Q6ZUB0 917 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 TMEM105Q8N8V8 129 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 LNX1Q8TBB1 728 aaPredicted RBP30.42■■■□□ 2.46
UBFD1-206ENST00000566669 PAAF1Q9BRP4 392 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 CCDC94Q9BW85 323 aaPredicted RBP30.42■■■□□ 2.46
UBFD1-206ENST00000566669 SMOC2Q9H3U7 446 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 SLC38A7Q9NVC3 462 aa30.42■■■□□ 2.46
UBFD1-206ENST00000566669 C2orf16Q68DN1 1984 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 POU2F2P09086 479 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 TOB1P50616 345 aaPredicted RBP30.41■■■□□ 2.46
UBFD1-206ENST00000566669 ECM1Q16610 540 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 UVSSAQ2YD98 709 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 EEF1DP3Q658K8 133 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 PRSS55Q6UWB4 352 aaPredicted RBP30.41■■■□□ 2.46
UBFD1-206ENST00000566669 CEP57Q86XR8 500 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 RABGGTAQ92696 567 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 MRPL4Q9BYD3 311 aaKnown RBP30.41■■■□□ 2.46
UBFD1-206ENST00000566669 GDAQ9Y2T3 454 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 PCDHB6Q9Y5E3 794 aa30.41■■■□□ 2.46
UBFD1-206ENST00000566669 CCDC169A6NNP5 214 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 PROB1E7EW31 1015 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 N4BP1O75113 896 aaKnown RBP30.4■■■□□ 2.46
UBFD1-206ENST00000566669 XYLBO75191 536 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 CENPBP07199 599 aaPredicted RBP30.4■■■□□ 2.46
UBFD1-206ENST00000566669 AOC1P19801 751 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 GRM5P41594 1212 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 NT5DC1Q5TFE4 455 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 GLYCTKQ8IVS8 523 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 FEZF2Q8TBJ5 459 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 DDX27Q96GQ7 796 aaKnown RBP30.4■■■□□ 2.46
UBFD1-206ENST00000566669 PPP1R10Q96QC0 940 aaKnown RBP30.4■■■□□ 2.46
UBFD1-206ENST00000566669 CLSTN3Q9BQT9 956 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 KIFC3Q9BVG8 833 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 PLXNA3P51805 1871 aa30.4■■■□□ 2.46
UBFD1-206ENST00000566669 B3GAT3O94766 335 aa30.39■■■□□ 2.46
UBFD1-206ENST00000566669 SRFP11831 508 aa30.39■■■□□ 2.46
UBFD1-206ENST00000566669 LAMP2P13473 410 aa30.39■■■□□ 2.46
UBFD1-206ENST00000566669 RPL17P18621 184 aaKnown RBP30.39■■■□□ 2.46
UBFD1-206ENST00000566669 NPTX2P47972 431 aa30.39■■■□□ 2.46
UBFD1-206ENST00000566669 HASPINQ8TF76 798 aa30.39■■■□□ 2.46
UBFD1-206ENST00000566669 ARHGAP28Q9P2N2 729 aa30.39■■■□□ 2.46
UBFD1-206ENST00000566669 MTCL1Q9Y4B5 1905 aaKnown RBP30.39■■■□□ 2.46
UBFD1-206ENST00000566669 FGFR3P22607 806 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 PEX3P56589 373 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 RAB33AQ14088 237 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 NBR1Q14596 966 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 PPM1LQ5SGD2 360 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 SLC44A3Q8N4M1 653 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 FLCNQ8NFG4 579 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 MYADMQ96S97 322 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 PHOX2BQ99453 314 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 ACO2Q99798 780 aaKnown RBP30.38■■■□□ 2.45
UBFD1-206ENST00000566669 KMT5AQ9NQR1 393 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 EIF4ENIF1Q9NRA8 985 aaKnown RBP30.38■■■□□ 2.45
UBFD1-206ENST00000566669 KCND2Q9NZV8 630 aa30.38■■■□□ 2.45
UBFD1-206ENST00000566669 H0Y858 1186 aa30.37■■■□□ 2.45
UBFD1-206ENST00000566669 C8orf34Q49A92 452 aa30.37■■■□□ 2.45
UBFD1-206ENST00000566669 ANKS3Q6ZW76 656 aa30.37■■■□□ 2.45
UBFD1-206ENST00000566669 SIX5Q8N196 739 aa30.37■■■□□ 2.45
UBFD1-206ENST00000566669 NTPCRQ9BSD7 190 aaKnown RBP30.37■■■□□ 2.45
UBFD1-206ENST00000566669 GTF3C5Q9Y5Q8 519 aaPredicted RBP30.37■■■□□ 2.45
UBFD1-206ENST00000566669 BACE2Q9Y5Z0 518 aa30.37■■■□□ 2.45
UBFD1-206ENST00000566669 HIP1RO75146 1068 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 EDN1P05305 212 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 C8AP07357 584 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 MCF2P10911 925 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 FSHRP23945 695 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 GUCY2CP25092 1073 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 UPP1Q16831 310 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 ZNF568Q3ZCX4 644 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 XKR4Q5GH76 650 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 GET4Q7L5D6 327 aaPredicted RBP30.36■■■□□ 2.45
UBFD1-206ENST00000566669 PTPRHQ9HD43 1115 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 MTRRQ9UBK8 725 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 CACNG4Q9UBN1 327 aa30.36■■■□□ 2.45
UBFD1-206ENST00000566669 SMIM28A0A1B0GU29 152 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 ANHXE9PGG2 379 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 E9PMD0 336 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 GFRA3O60609 400 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 SMTNP53814 917 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 CWF19L1Q69YN2 538 aaKnown RBP30.35■■■□□ 2.45
UBFD1-206ENST00000566669 RINT1Q6NUQ1 792 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 C1orf186Q6ZWK4 172 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 USP20Q9Y2K6 914 aa30.35■■■□□ 2.45
UBFD1-206ENST00000566669 SLC26A4O43511 780 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 MYBP10242 640 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 SCP2P22307 547 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 NBL1P41271 181 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 MCM2P49736 904 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 ATP2C1P98194 919 aaPredicted RBP30.34■■■□□ 2.45
UBFD1-206ENST00000566669 STRN3Q13033 797 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 HYIQ5T013 277 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 ARL6IP4Q66PJ3 421 aaKnown RBP30.34■■■□□ 2.45
UBFD1-206ENST00000566669 MCTP1Q6DN14 999 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 ALKAL1Q6UXT8 129 aa30.34■■■□□ 2.45
UBFD1-206ENST00000566669 MTSS1LQ765P7 747 aa30.34■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms