RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 PCDHGC5Q9Y5F6 944 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 PLSCR1O15162 318 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 SUN1O94901 812 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 WEE2P0C1S8 567 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 PGM5Q15124 567 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 LONRF1Q17RB8 773 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 WDR72Q3MJ13 1102 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 COBLL1Q53SF7 1204 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 PHLDB3Q6NSJ2 640 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 DPY19L2Q6NUT2 758 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 RBM46Q8TBY0 533 aaKnown RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 SMC6Q96SB8 1091 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 JPH2Q9BR39 696 aaPredicted RBP12.35□□□□□ -0.43
CDH1-210ENST00000566612 MRIQ9BWK5 157 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 UVRAGQ9P2Y5 699 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 GGT7Q9UJ14 662 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 VAV3Q9UKW4 847 aa12.35□□□□□ -0.43
CDH1-210ENST00000566612 CASZ1Q86V15 1759 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 FRMPD4Q14CM0 1322 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 SYF2O95926 243 aaKnown RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 E2F5Q15329 346 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 HIBCHQ6NVY1 386 aaPredicted RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 ENOSF1Q7L5Y1 443 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 RBBP8NLQ8NC74 664 aaPredicted RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 TTC16Q8NEE8 873 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 ACTRT1Q8TDG2 376 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 RNF34Q969K3 372 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 TIPINQ9BVW5 301 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 PXMP2Q9NR77 195 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 FBXO40Q9UH90 709 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 PCDHB2Q9Y5E7 798 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 RASSF10A6NK89 507 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 ATP9AO75110 1047 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 TJP3O95049 919 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 CA4P22748 312 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 PHBP35232 272 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 IREB2P48200 963 aaKnown RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 BACE1P56817 501 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 GPS1Q13098 491 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 DUOXA2Q1HG44 320 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 HYIQ5T013 277 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 SYCP2LQ5T4T6 812 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 PCNX4Q63HM2 1172 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 DARS2Q6PI48 645 aaKnown RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 NT5DC3Q86UY8 548 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.34□□□□□ -0.43
CDH1-210ENST00000566612 ACSF2Q96CM8 615 aaPredicted RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 ELP3Q9H9T3 547 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 CYP26B1Q9NR63 512 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 BRAFP15056 766 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 KYNUQ16719 465 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 ZCWPW2Q504Y3 356 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 APOBEC3FQ8IUX4 373 aaKnown RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 ZSWIM1Q9BR11 485 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 MRPL4Q9BYD3 311 aaKnown RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 EPN3Q9H201 632 aa12.34□□□□□ -0.43
CDH1-210ENST00000566612 RANBP17Q9H2T7 1088 aaKnown RBP12.34□□□□□ -0.43
CDH1-210ENST00000566612 YDJCA8MPS7 323 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 RASA4BC9J798 803 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 ANKRD63C9JTQ0 380 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 RASA4O43374 803 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 ABCD1P33897 745 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 GPC3P51654 580 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 PSMC1P62191 440 aaKnown RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 IL9RQ01113 521 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 ITIH3Q06033 890 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 IZUMO3Q5VZ72 239 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 APBB1IPQ7Z5R6 666 aaPredicted RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 FAM83AQ86UY5 434 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 LRRC8CQ8TDW0 803 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 ZNF473Q8WTR7 871 aaKnown RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 NUP98P52948 1817 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 IGSF9BQ9UPX0 1349 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 P4HA2O15460 535 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 RRM1P23921 792 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 NOP14P78316 857 aaKnown RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 MAPK7Q13164 816 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 PPP6R3Q5H9R7 873 aaPredicted RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 LAMB4A4D0S4 1761 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 TBXAS1P24557 533 aaPredicted RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 SLC13A5Q86YT5 568 aaPredicted RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 C4orf19Q8IY42 314 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 LNX1Q8TBB1 728 aaPredicted RBP12.33□□□□□ -0.44
CDH1-210ENST00000566612 PYROXD1Q8WU10 500 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 KRT35Q92764 455 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 CFAP57Q96MR6 1250 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 SEPT10Q9P0V9 454 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 GTF3C4Q9UKN8 822 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 NUP188Q5SRE5 1749 aa12.33□□□□□ -0.44
CDH1-210ENST00000566612 MCF2LO15068 1137 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 CDR2Q01850 454 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 ARHGEF18Q6ZSZ5 1173 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 TBC1D1Q86TI0 1168 aaPredicted RBP12.32□□□□□ -0.44
CDH1-210ENST00000566612 MORC4Q8TE76 937 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 CYFIP2Q96F07 1278 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 PKD1L3Q7Z443 1732 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 PIK3CDO00329 1044 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 MED7O43513 233 aa12.32□□□□□ -0.44
CDH1-210ENST00000566612 PRKCBP05771 671 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms