RNA–Protein interactions for RNA: ENST00000566510.5

CDH1-209, Transcript of cadherin 1, humanhuman

TSL 5

Gene CDH1, Length 2,661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-209ENST00000566510 MTA2O94776 668 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 GHRP10912 638 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 CNGA1P29973 690 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 ADSSP30520 456 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 SPP2Q13103 211 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 TCEAL1Q15170 157 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 PWP2Q15269 919 aaKnown RBP15.23■□□□□ 0.03
CDH1-209ENST00000566510 KYNUQ16719 465 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 TRPM8Q7Z2W7 1104 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 TBC1D1Q86TI0 1168 aaPredicted RBP15.23■□□□□ 0.03
CDH1-209ENST00000566510 FAM160B2Q86V87 743 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 FBXL13Q8NEE6 735 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 HEMGNQ9BXL5 484 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 FEM1BQ9UK73 627 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 SPATA31A6Q5VVP1 1343 aa15.23■□□□□ 0.03
CDH1-209ENST00000566510 COL11A2P13942 1736 aaPredicted RBP15.23■□□□□ 0.03
CDH1-209ENST00000566510 TMEM120BA0PK00 339 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 MAPTP10636 758 aaKnown RBP15.22■□□□□ 0.03
CDH1-209ENST00000566510 ADCY8P40145 1251 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 SOX10P56693 466 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 ACAD10Q6JQN1 1059 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 TRMT10CQ7L0Y3 403 aaKnown RBP15.22■□□□□ 0.03
CDH1-209ENST00000566510 C12orf56Q8IXR9 622 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 GIMAP7Q8NHV1 300 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 PARD3BQ8TEW8 1205 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 CPA5Q8WXQ8 436 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 POMGNT1Q8WZA1 660 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 PWWP2AQ96N64 755 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 TMEM39BQ9GZU3 492 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 LRRC19Q9H756 370 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 AGO4Q9HCK5 861 aaKnown RBP15.22■□□□□ 0.03
CDH1-209ENST00000566510 ABCF3Q9NUQ8 709 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 FGFR1OP2Q9NVK5 253 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 RAB20Q9NX57 234 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 TBX20Q9UMR3 447 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 SYNPO2Q9UMS6 1093 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 DENND3A2RUS2 1198 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 THAP12O43422 761 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 DNAJC8O75937 253 aaPredicted RBP15.22■□□□□ 0.03
CDH1-209ENST00000566510 SCP2P22307 547 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 GJC1P36383 396 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 SSR1P43307 286 aaKnown RBP15.22■□□□□ 0.03
CDH1-209ENST00000566510 ITIH4Q14624 930 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 NUGGCQ68CJ6 796 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 LLGL2Q6P1M3 1020 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 FAM228AQ86W67 206 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 CCDC63Q8NA47 563 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 HELQQ8TDG4 1101 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 IWS1Q96ST2 819 aa15.22■□□□□ 0.03
CDH1-209ENST00000566510 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.22■□□□□ 0.03
CDH1-209ENST00000566510 SCAF8Q9UPN6 1271 aaKnown RBP15.22■□□□□ 0.03
CDH1-209ENST00000566510 ZNFX1Q9P2E3 1918 aaKnown RBP15.22■□□□□ 0.03
CDH1-209ENST00000566510 RAD17O75943 681 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 ITGA8P53708 1063 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 DLGAP5Q15398 846 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 TMEM109Q9BVC6 243 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 TRPC5Q9UL62 973 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 EXOC7Q9UPT5 735 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 SPDYE2BA6NHP3 402 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 YDJCA8MPS7 323 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 ONECUT3O60422 494 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 SPDYE6P0CI01 402 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 CAP2P40123 477 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 ELF3P78545 371 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 MRPS9P82933 396 aaKnown RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 DMP1Q13316 513 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 ZKSCAN8Q15776 578 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 PSPC1Q8WXF1 523 aaKnown RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 SNF8Q96H20 258 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 ROPN1BQ9BZX4 212 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 ROPN1Q9HAT0 212 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 TMEM8AQ9HCN3 771 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 A1CFQ9NQ94 594 aaKnown RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 KMT5AQ9NQR1 393 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 AAASQ9NRG9 546 aa15.21■□□□□ 0.03
CDH1-209ENST00000566510 GEMIN8Q9NWZ8 242 aaKnown RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 ZNF70Q9UC06 446 aaPredicted RBP15.21■□□□□ 0.03
CDH1-209ENST00000566510 TESPA1A2RU30 521 aaPredicted RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 ICAM1P05362 532 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 ITIH2P19823 946 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 SSTR3P32745 418 aaPredicted RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 NPTX2P47972 431 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 HSD17B4P51659 736 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 LMBRD2Q68DH5 695 aaPredicted RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 RAVER2Q9HCJ3 691 aaKnown RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 WHRNQ9P202 907 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 ANAPC5Q9UJX4 755 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 ASTN2O75129 1339 aaPredicted RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 FSCN2O14926 492 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 ATP9AO75110 1047 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 GAS8O95995 478 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 EZRP15311 586 aaKnown RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 ATF2P15336 505 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 NF2P35240 595 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 GSCP56915 257 aaPredicted RBP15.2■□□□□ 0.02
CDH1-209ENST00000566510 MFSD5Q6N075 450 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 SV2AQ7L0J3 742 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 OGFOD1Q8N543 542 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 FAM151AQ8WW52 585 aa15.2■□□□□ 0.02
CDH1-209ENST00000566510 BICD1Q96G01 975 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms