RNA–Protein interactions for RNA: ENST00000566339.5

SPSB3-208, Transcript of splA/ryanodine receptor domain and SOCS box containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB3, Length 1,784 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB3-208ENST00000566339 CLNS1AP54105 237 aaKnown RBP23.07■■□□□ 1.28
SPSB3-208ENST00000566339 GTF2BQ00403 316 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 FMO1Q01740 532 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 KRT17Q04695 432 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 STRN3Q13033 797 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 C1orf220Q5T0J3 134 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 RBM26Q5T8P6 1007 aaKnown RBP23.07■■□□□ 1.28
SPSB3-208ENST00000566339 ASRGL1Q7L266 308 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 ZNF653Q96CK0 615 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 ZNF577Q9BSK1 485 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 UNC45AQ9H3U1 944 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 UBN1Q9NPG3 1134 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 FAM198AQ9UFP1 575 aa23.07■■□□□ 1.28
SPSB3-208ENST00000566339 DDTLA6NHG4 134 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-208ENST00000566339 ANKRD63C9JTQ0 380 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 CDH16O75309 829 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 SGPL1O95470 568 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 PLS3P13797 630 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 CCNB1P14635 433 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 STAT2P52630 851 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 E2F5Q15329 346 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 DOK7Q18PE1 504 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 FAM133BQ5BKY9 247 aaKnown RBP23.06■■□□□ 1.28
SPSB3-208ENST00000566339 SPDYAQ5MJ70 313 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 PADI6Q6TGC4 694 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 RAB3IPQ96QF0 476 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-208ENST00000566339 LXNQ9BS40 222 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 CCDC113Q9H0I3 377 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 IKZF4Q9H2S9 585 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 PPCSQ9HAB8 311 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 AGAP1Q9UPQ3 857 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 EXOC7Q9UPT5 735 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 SBDSQ9Y3A5 250 aaKnown RBP eCLIP23.06■■□□□ 1.28
SPSB3-208ENST00000566339 NDC80O14777 642 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 LIN7AO14910 233 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-208ENST00000566339 ALDH1B1P30837 517 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 SLCO1A2P46721 670 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 IFNAR2P48551 515 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 GPC3P51654 580 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 USP37Q86T82 979 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 PNMA8AQ86V59 439 aaPredicted RBP23.06■■□□□ 1.28
SPSB3-208ENST00000566339 KSR1Q8IVT5 923 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 ATL2Q8NHH9 583 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 DHX38Q92620 1227 aaKnown RBP23.06■■□□□ 1.28
SPSB3-208ENST00000566339 KLHL29Q96CT2 875 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 NKIRAS1Q9NYS0 192 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 HSPBP1Q9NZL4 362 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 KLHL14Q9P2G3 628 aa23.06■■□□□ 1.28
SPSB3-208ENST00000566339 TP73O15350 636 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 P4HBP07237 508 aaKnown RBP23.05■■□□□ 1.28
SPSB3-208ENST00000566339 IVDP26440 423 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 LACTBP83111 547 aaPredicted RBP23.05■■□□□ 1.28
SPSB3-208ENST00000566339 TNIP1Q15025 636 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 ZNF677Q86XU0 584 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 ANKRD35Q8N283 1001 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 CFAP61Q8NHU2 1237 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 TMC2Q8TDI7 906 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 TMEM117Q9H0C3 514 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 RANBP17Q9H2T7 1088 aaKnown RBP23.05■■□□□ 1.28
SPSB3-208ENST00000566339 FGFR1OP2Q9NVK5 253 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 MYH11P35749 1972 aa23.05■■□□□ 1.28
SPSB3-208ENST00000566339 MAGEB2O15479 319 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 ZC3H11AO75152 810 aaKnown RBP eCLIP23.04■■□□□ 1.28
SPSB3-208ENST00000566339 ATF2P15336 505 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 CYP11B1P15538 503 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 DLG4P78352 724 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 MTFR1Q15390 333 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 NUGGCQ68CJ6 796 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 KRT39Q6A163 491 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 PPP1R2P3Q6NXS1 205 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 RGS9BPQ6ZS82 235 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 SH3BP5LQ7L8J4 393 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 TXLNGQ9NUQ3 528 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 ASIC3Q9UHC3 531 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 TCRBV7S2A1N4TA0A589 114 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 CHMP2AO43633 222 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 GCLMP48507 274 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 ALDH5A1P51649 535 aaPredicted RBP23.04■■□□□ 1.28
SPSB3-208ENST00000566339 LONRF1Q17RB8 773 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 PARP6Q2NL67 630 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 STRIP1Q5VSL9 837 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 CCDC89Q8N998 374 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 FBF1Q8TES7 1133 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 CHURC1Q8WUH1 139 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 CNKSR1Q969H4 720 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 ARHGEF10LQ9HCE6 1279 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 TMEM8AQ9HCN3 771 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 SERPINA10Q9UK55 444 aa23.04■■□□□ 1.28
SPSB3-208ENST00000566339 RPL26L1Q9UNX3 145 aaKnown RBP23.04■■□□□ 1.28
SPSB3-208ENST00000566339 PSME4Q14997 1843 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 E7ENQ6 273 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 G3V3G9 751 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 GRIN3BO60391 1043 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 ANP32DO95626 131 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 SLURP2P0DP57 97 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 BRAFP15056 766 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 STX2P32856 288 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 SNAP25P60880 206 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 DCAF8Q5TAQ9 597 aa23.03■■□□□ 1.28
SPSB3-208ENST00000566339 CCDC25Q86WR0 208 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms