RNA–Protein interactions for RNA: ENST00000566230.5

COMMD4-214, Transcript of COMM domain containing 4, humanhuman

TSL 3

Gene COMMD4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-214ENST00000566230 MCM2P49736 904 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 MLF2Q15773 248 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-214ENST00000566230 RSPO4Q2I0M5 234 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-214ENST00000566230 ZNF528Q3MIS6 628 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 SLC44A4Q53GD3 710 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 FAM171A1Q5VUB5 890 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 HACE1Q8IYU2 909 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 HASPINQ8TF76 798 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 PIK3R5Q8WYR1 880 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 EIF2AK1Q9BQI3 630 aaKnown RBP14.83□□□□□ -0.04
COMMD4-214ENST00000566230 LLPHQ9BRT6 129 aaKnown RBP14.83□□□□□ -0.04
COMMD4-214ENST00000566230 TTPALQ9BTX7 342 aa14.83□□□□□ -0.04
COMMD4-214ENST00000566230 ORC3Q9UBD5 711 aaPredicted RBP14.83□□□□□ -0.04
COMMD4-214ENST00000566230 SF3B1O75533 1304 aaKnown RBP eCLIP14.83□□□□□ -0.04
COMMD4-214ENST00000566230 A0A087WWV3 80 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 CASTOR2A6NHX0 329 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 TTLL13PA6NNM8 815 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 PTGESO14684 152 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 KINO60870 393 aaKnown RBP14.82□□□□□ -0.04
COMMD4-214ENST00000566230 DGAT1O75907 488 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 KIF4AO95239 1232 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 C8AP07357 584 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 CD72P21854 359 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 PRKCQQ04759 706 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 TUSC3Q13454 348 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 NAB2Q15742 525 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 PSMD5Q16401 504 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 PPM1LQ5SGD2 360 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 CEP57Q86XR8 500 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 ANKEF1Q9NU02 776 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 SPATA6Q9NWH7 488 aaPredicted RBP14.82□□□□□ -0.04
COMMD4-214ENST00000566230 FBXO4Q9UKT5 387 aa14.82□□□□□ -0.04
COMMD4-214ENST00000566230 FAM170BA6NMN3 283 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 LAMTOR5O43504 91 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 LARGE1O95461 756 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 FDPSP14324 419 aaKnown RBP14.81□□□□□ -0.04
COMMD4-214ENST00000566230 IGFBP6P24592 240 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-214ENST00000566230 HOXA9P31269 272 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 RARRES1P49788 294 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 UBXN2BQ14CS0 331 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 VARS2Q5ST30 1063 aaKnown RBP14.81□□□□□ -0.04
COMMD4-214ENST00000566230 LIN9Q5TKA1 542 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 POTEHQ6S545 545 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 MTSS1LQ765P7 747 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 SLFN12Q8IYM2 578 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 NSUN7Q8NE18 718 aaKnown RBP14.81□□□□□ -0.04
COMMD4-214ENST00000566230 NAP1L4Q99733 375 aaKnown RBP14.81□□□□□ -0.04
COMMD4-214ENST00000566230 KXD1Q9BQD3 176 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 BCO2Q9BYV7 579 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 OSBPL6Q9BZF3 934 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 POLR3FQ9H1D9 316 aaPredicted RBP14.81□□□□□ -0.04
COMMD4-214ENST00000566230 LTB4R2Q9NPC1 389 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 HCFC1R1Q9NWW0 138 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 DNMT3BQ9UBC3 853 aaKnown RBP14.81□□□□□ -0.04
COMMD4-214ENST00000566230 CHD8Q9HCK8 2581 aa14.81□□□□□ -0.04
COMMD4-214ENST00000566230 BAG4O95429 457 aaKnown RBP14.8□□□□□ -0.04
COMMD4-214ENST00000566230 CSTF1Q05048 431 aaKnown RBP14.8□□□□□ -0.04
COMMD4-214ENST00000566230 RAB33AQ14088 237 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 AXDND1Q5T1B0 1012 aaPredicted RBP14.8□□□□□ -0.04
COMMD4-214ENST00000566230 PPP4R3CPQ6ZMV5 832 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 NPAS3Q8IXF0 933 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 PIGOQ8TEQ8 1089 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 NELL1Q92832 810 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 PLA2G2FQ9BZM2 168 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 FZD8Q9H461 694 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 GPRC5CQ9NQ84 441 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 SNTG2Q9NY99 539 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 PCDHA12Q9UN75 941 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 POLIQ9UNA4 740 aa14.8□□□□□ -0.04
COMMD4-214ENST00000566230 SHISA7A6NL88 538 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 SPTLC1O15269 473 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 XYLBO75191 536 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 POU2F2P09086 479 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 OR1D2P34982 312 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 MAP1BP46821 2468 aaKnown RBP14.79□□□□□ -0.04
COMMD4-214ENST00000566230 NR5A1Q13285 461 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 FZD5Q13467 585 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 RSPO2Q6UXX9 243 aaPredicted RBP14.79□□□□□ -0.04
COMMD4-214ENST00000566230 ZBTB44Q8NCP5 570 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 SLC7A14Q8TBB6 771 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 TNFRSF25Q93038 417 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 CLDN23Q96B33 292 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 BORCS6Q96GS4 357 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 PDZD7Q9H5P4 517 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 NCDNQ9UBB6 729 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 USP20Q9Y2K6 914 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 PCDHGA2Q9Y5H1 932 aa14.79□□□□□ -0.04
COMMD4-214ENST00000566230 LRRIQ4A6NIV6 560 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 WNT7AO00755 349 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 USO1O60763 962 aaKnown RBP14.78□□□□□ -0.04
COMMD4-214ENST00000566230 LILRB5O75023 590 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 THP07101 528 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 FGFR3P22607 806 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 TARSP26639 723 aaKnown RBP14.78□□□□□ -0.04
COMMD4-214ENST00000566230 HMGN5P82970 282 aaKnown RBP14.78□□□□□ -0.04
COMMD4-214ENST00000566230 PFKPQ01813 784 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 FAM187BQ17R55 369 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 UVSSAQ2YD98 709 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 ZBTB41Q5SVQ8 909 aa14.78□□□□□ -0.04
COMMD4-214ENST00000566230 CDCA2Q69YH5 1023 aaPredicted RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms