RNA–Protein interactions for RNA: ENST00000565697.1

CNOT1-208, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-208ENST00000565697 CUTAO60888 179 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 TBX10O75333 385 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 BRD1O95696 1058 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 SOD2P04179 222 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 EDN1P05305 212 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 URODP06132 367 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 IL9P15248 144 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 HOXB8P17481 243 aaPredicted RBP10.85□□□□□ -0.67
CNOT1-208ENST00000565697 GRM5P41594 1212 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 STAT6P42226 847 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 MATR3P43243 847 aaKnown RBP eCLIP10.85□□□□□ -0.67
CNOT1-208ENST00000565697 DLX2Q07687 328 aaPredicted RBP10.85□□□□□ -0.67
CNOT1-208ENST00000565697 BECN1Q14457 450 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 KYAT1Q16773 422 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 ZPBP2Q6X784 338 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 TAS1R3Q7RTX0 852 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 HAUS6Q7Z4H7 955 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 TMEM173Q86WV6 379 aaPredicted RBP10.85□□□□□ -0.67
CNOT1-208ENST00000565697 FAM178BQ8IXR5 827 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 KCNG4Q8TDN1 519 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 BICD1Q96G01 975 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 ACAP3Q96P50 834 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 HERC2P3Q9BVR0 1158 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 TARS2Q9BW92 718 aaKnown RBP10.85□□□□□ -0.67
CNOT1-208ENST00000565697 CDT1Q9H211 546 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 ZHX3Q9H4I2 956 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 MRPL17Q9NRX2 175 aaKnown RBP10.85□□□□□ -0.67
CNOT1-208ENST00000565697 MARCH5Q9NX47 278 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 CLEC1BQ9P126 229 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 PRKAG3Q9UGI9 489 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 USP20Q9Y2K6 914 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 MYH15Q9Y2K3 1946 aa10.85□□□□□ -0.67
CNOT1-208ENST00000565697 CLDN3O15551 220 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 B4GALT3O60512 393 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 CLASP2O75122 1294 aaKnown RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 TADA2AO75478 443 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 PROZP22891 400 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 GLUD2P49448 558 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 CREMQ03060 361 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 ELAVL2Q12926 359 aaKnown RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 KCNC3Q14003 757 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 HSP90AA2PQ14568 343 aaPredicted RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 NOLC1Q14978 699 aaKnown RBP eCLIP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 PTPN14Q15678 1187 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 SMAD2Q15796 467 aaKnown RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 TPRNQ4KMQ1 711 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 FOXD4L5Q5VV16 416 aaPredicted RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 KIAA1841Q6NSI8 718 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 ANKRD54Q6NXT1 300 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 ELMSAN1Q6PJG2 1045 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 USP49Q70CQ1 688 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 ZBTB33Q86T24 672 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 GPR65Q8IYL9 337 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 BCL7CQ8WUZ0 217 aaPredicted RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 FOXD4L4Q8WXT5 416 aaPredicted RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 MSLNLQ96KJ4 702 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 UROC1Q96N76 676 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 POP1Q99575 1024 aaKnown RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 CUEDC2Q9H467 287 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 SLC38A7Q9NVC3 462 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 TFIP11Q9UBB9 837 aaKnown RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 SEL1LQ9UBV2 794 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 DPP7Q9UHL4 492 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 ADAM28Q9UKQ2 775 aa10.84□□□□□ -0.67
CNOT1-208ENST00000565697 BARX2Q9UMQ3 279 aaPredicted RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.84□□□□□ -0.67
CNOT1-208ENST00000565697 PTGESO14684 152 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 HNRNPDLO14979 420 aaKnown RBP10.83□□□□□ -0.68
CNOT1-208ENST00000565697 GLP2RO95838 553 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 GAP43P17677 238 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 KLRC2P26717 231 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 LIG4P49917 911 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 GTF2BQ00403 316 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 AMPD3Q01432 767 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 MCL1Q07820 350 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 CLUL1Q15846 466 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 USP41Q3LFD5 358 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 LLGL2Q6P1M3 1020 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 FUT10Q6P4F1 479 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 DYMQ7RTS9 669 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 ADHFE1Q8IWW8 467 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 RNF168Q8IYW5 571 aaPredicted RBP10.83□□□□□ -0.68
CNOT1-208ENST00000565697 SMRP1Q8NCR6 262 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 LRRC15Q8TF66 581 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 DDX12PQ92771 950 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 HVCN1Q96D96 273 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
CNOT1-208ENST00000565697 PYM1Q9BRP8 204 aaKnown RBP10.83□□□□□ -0.68
CNOT1-208ENST00000565697 ST6GALNAC4Q9H4F1 302 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.83□□□□□ -0.68
CNOT1-208ENST00000565697 DZANK1Q9NVP4 752 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 ANKFY1Q9P2R3 1169 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 TBX20Q9UMR3 447 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 ATP6V1DQ9Y5K8 247 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 HCFC2Q9Y5Z7 792 aa10.83□□□□□ -0.68
CNOT1-208ENST00000565697 SF3B1O75533 1304 aaKnown RBP eCLIP10.83□□□□□ -0.68
CNOT1-208ENST00000565697 SMIM28A0A1B0GU29 152 aa10.82□□□□□ -0.68
CNOT1-208ENST00000565697 CASTOR2A6NHX0 329 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms