RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SH3GLB2Q9NR46 395 aa6.94□□□□□ -1.3
UBFD1-204ENST00000565634 NCDNQ9UBB6 729 aa6.94□□□□□ -1.3
UBFD1-204ENST00000565634 ADD3Q9UEY8 706 aaKnown RBP6.94□□□□□ -1.3
UBFD1-204ENST00000565634 SEC63Q9UGP8 760 aaKnown RBP6.94□□□□□ -1.3
UBFD1-204ENST00000565634 FBXL21Q9UKT6 434 aa6.94□□□□□ -1.3
UBFD1-204ENST00000565634 USP18Q9UMW8 372 aa6.94□□□□□ -1.3
UBFD1-204ENST00000565634 SLC6A14Q9UN76 642 aa6.94□□□□□ -1.3
UBFD1-204ENST00000565634 ABCB11O95342 1321 aa6.94□□□□□ -1.3
UBFD1-204ENST00000565634 ASXL3Q9C0F0 2248 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 ATG2BQ96BY7 2078 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 A0A0A0MRY4 1105 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 HIDE1A8MVS5 230 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 GCOM1H8Y6P7 765 aaPredicted RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 HAS3O00219 553 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 NKRFO15226 690 aaKnown RBP eCLIP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 STX6O43752 255 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 CDKL5O76039 1030 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 GH1P01241 217 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 CHRNA1P02708 482 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 POLR2MP0CAP2 368 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 MYCLP12524 364 aaPredicted RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 GHRHRQ02643 423 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 TBC1D8BQ0IIM8 1120 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 RESTQ13127 1097 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 MRPL58Q14197 206 aaKnown RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 ZNF174Q15697 407 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 IL17AQ16552 155 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 LPAL2Q16609 132 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 DGKDQ16760 1214 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 DUSP6Q16828 381 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 INF2Q27J81 1249 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 TKFCQ3LXA3 575 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 SPOUT1Q5T280 376 aaKnown RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 MCTP1Q6DN14 999 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 CPLX2Q6PUV4 134 aaKnown RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 PIK3AP1Q6ZUJ8 805 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 SERINC5Q86VE9 423 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 C4orf32Q8N8J7 132 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 FAM184AQ8NB25 1140 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 SCG3Q8WXD2 468 aaKnown RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 CRYGNQ8WXF5 182 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 RSAD2Q8WXG1 361 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 PPP2R3CQ969Q6 453 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 ZNF689Q96CS4 500 aaPredicted RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 ZBTB10Q96DT7 871 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 DRC1Q96MC2 740 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 GSX2Q9BZM3 304 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 SAP130Q9H0E3 1048 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 RNPEPQ9H4A4 650 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 SETD4Q9NVD3 440 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 CA14Q9ULX7 337 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 PCDHA4Q9UN74 947 aa6.93□□□□□ -1.3
UBFD1-204ENST00000565634 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.93□□□□□ -1.3
UBFD1-204ENST00000565634 ESYT2A0FGR8 921 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 C17orf102A2RUQ5 167 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 VPS37CA5D8V6 355 aaPredicted RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 FAM86B1E9PN63 330 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 ATP9AO75110 1047 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 DGKIO75912 1065 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 TDP2O95551 362 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 FAM86B2P0C5J1 330 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 MYBP10242 640 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 ITGB5P18084 799 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 U2AF2P26368 475 aaKnown RBP eCLIP6.92□□□□□ -1.34e-7■□□□□ 8.2
UBFD1-204ENST00000565634 ANP32AP39687 249 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 MRPL12P52815 198 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 HMGN5P82970 282 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 BECN1Q14457 450 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 PGM5Q15124 567 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 PRSS36Q5K4E3 855 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 RARS2Q5T160 578 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 VSIG10LQ86VR7 867 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 DAGLBQ8NCG7 672 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 TBCKQ8TEA7 893 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 NUDT8Q8WV74 236 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 CUL5Q93034 780 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 RMDN3Q96TC7 470 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 PDCD2LQ9BRP1 358 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 ANO3Q9BYT9 981 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 TMEM60Q9H2L4 133 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 RC3H2Q9HBD1 1191 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 C6orf50Q9HD87 102 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 PARD6AQ9NPB6 346 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 PXMP2Q9NR77 195 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 DMGDHQ9UI17 866 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 NR2E1Q9Y466 385 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 PCDHB6Q9Y5E3 794 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 CLIC4Q9Y696 253 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 EMSYQ7Z589 1322 aa6.92□□□□□ -1.3
UBFD1-204ENST00000565634 FLNBO75369 2602 aaKnown RBP6.92□□□□□ -1.3
UBFD1-204ENST00000565634 MYH15Q9Y2K3 1946 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 SHROOM3Q8TF72 1996 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 A0A087WWV3 80 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 C9orf172C9J069 976 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 SLC37A4O43826 429 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 HSP90AA1P07900 732 aaKnown RBP6.91□□□□□ -1.3
UBFD1-204ENST00000565634 C1QTNF9P0C862 333 aa6.91□□□□□ -1.3
UBFD1-204ENST00000565634 ZSCAN22P10073 491 aaPredicted RBP6.91□□□□□ -1.3
UBFD1-204ENST00000565634 GRNP28799 593 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms