RNA–Protein interactions for RNA: ENST00000565556.5

CNEP1R1-206, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 1,707 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-206ENST00000565556 COG1Q8WTW3 980 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 NLRP7Q8WX94 980 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 FBXL18Q96ME1 805 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 SCLT1Q96NL6 688 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 TARS2Q9BW92 718 aaKnown RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 TSGA10Q9BZW7 698 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 INO80BQ9C086 356 aaPredicted RBP10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM107BQ9H098 131 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 IFT122Q9HBG6 1241 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 TRIM10Q9UDY6 481 aa10.19□□□□□ -0.78
CNEP1R1-206ENST00000565556 TRIP12Q14669 1992 aaPredicted RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 A0A087WZ62 844 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 A0A0B4J269 797 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 TISP43B9A030 160 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 TREHO43280 583 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 EXTL3O43909 919 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 PHACTR2O75167 634 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 TOM1L1O75674 476 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 AFPP02771 609 aaKnown RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 MATR3P43243 847 aaKnown RBP eCLIP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 GPC3P51654 580 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 MCCD1P59942 119 aaPredicted RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 MBTD1Q05BQ5 628 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 PTPN11Q06124 597 aaPredicted RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 KCNH2Q12809 1159 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 PRPF4BQ13523 1007 aaKnown RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 FRMPD3Q5JV73 1810 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 TCERG1LQ5VWI1 586 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 LHX8Q68G74 356 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 TSHZ1Q6ZSZ6 1077 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 RSPH3Q86UC2 560 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 GPD1LQ8N335 351 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 MMS19Q96T76 1030 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 ACO2Q99798 780 aaKnown RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 FDXACB1Q9BRP7 624 aaPredicted RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 GCOM2Q9BZD3 368 aaPredicted RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 XRN2Q9H0D6 950 aaKnown RBP eCLIP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM49AQ9H0Q0 323 aaPredicted RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 GTF2IRD1Q9UHL9 959 aa10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 AGO2Q9UKV8 859 aaKnown RBP10.18□□□□□ -0.78
CNEP1R1-206ENST00000565556 ZNF233A6NK53 670 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 EIF3CLB5ME19 914 aaKnown RBP10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 CLDN3O15551 220 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 SYF2O95926 243 aaKnown RBP10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 VAMP7P51809 220 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 ACLYP53396 1101 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 C1QBPQ07021 282 aaKnown RBP10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 BFSP1Q12934 665 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 SNRNP35Q16560 246 aaKnown RBP10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 SLC9C1Q4G0N8 1177 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 DCAF17Q5H9S7 520 aaPredicted RBP10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 RUFY4Q6ZNE9 571 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 RDH13Q8NBN7 331 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 TMC2Q8TDI7 906 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 PPM1EQ8WY54 764 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 SLC35C1Q96A29 364 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 VTI1AQ96AJ9 217 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 PCMTD1Q96MG8 357 aaPredicted RBP10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 EIF3CQ99613 913 aaKnown RBP10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 MSTO1Q9BUK6 570 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 SEZ6LQ9BYH1 1024 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 ADAMTS10Q9H324 1103 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 TNFSF13BQ9Y275 285 aa10.17□□□□□ -0.78
CNEP1R1-206ENST00000565556 CNTNAP2Q9UHC6 1331 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 GTPBP10A4D1E9 387 aaKnown RBP10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 ENC1O14682 589 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 GPR32O75388 356 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 TRIM21P19474 475 aaKnown RBP10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 CORO7P57737 925 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 ZBED6P86452 979 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 CDK17Q00537 523 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 MCL1Q07820 350 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 HIC1Q14526 733 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 TMEM132AQ24JP5 1023 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 TTC31Q49AM3 519 aaPredicted RBP10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM47CQ5HY64 1035 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 FIGNQ5HY92 759 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 ATF7IP2Q5U623 682 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 WDR59Q6PJI9 974 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 MPZL3Q6UWV2 235 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 APBB1IPQ7Z5R6 666 aaPredicted RBP10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM76AQ8TAV0 307 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 IPO4Q8TEX9 1081 aaKnown RBP10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 SH3TC2Q8TF17 1288 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 DNAJB3Q8WWF6 145 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 SAAL1Q96ER3 474 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 MFSD14AQ96MC6 490 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 GLT1D1Q96MS3 346 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 FAM213AQ9BRX8 229 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 TCHPQ9BT92 498 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 TTYH3Q9C0H2 523 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 A0A1W2PQJ5 194 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 GOLGA8IPA6NC78 632 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 GOLGA8JA6NMD2 632 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 KBTBD13C9JR72 458 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 M0QZ92 97 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 OGTO15294 1046 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 P4HA2O15460 535 aa10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 SHOX2O60902 331 aaPredicted RBP10.16□□□□□ -0.78
CNEP1R1-206ENST00000565556 ERLIN2O94905 339 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms