RNA–Protein interactions for RNA: ENST00000565324.5

SMG1-211, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 12,465 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-211ENST00000565324 IFNAR1P17181 557 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 AP3M2P53677 418 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ACTR2P61160 394 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 HPCAP84074 193 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ITIH4Q14624 930 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 RNPC3Q96LT9 517 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 UNC45AQ9H3U1 944 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 RNF123Q5XPI4 1314 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TSPAN9O75954 239 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 STAT5AP42229 794 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 PEX5P50542 639 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 STAT5BP51692 787 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 FAM83EQ2M2I3 478 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TBCKQ8TEA7 893 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 NUP85Q9BW27 656 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 CNOT8Q9UFF9 292 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 FAM153AQ9UHL3 310 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 THRAP3Q9Y2W1 955 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 USP19O94966 1318 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 H0YIN7 160 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 NEMP1O14524 444 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 GRK2P25098 689 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 PHKA2P46019 1235 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ANXA11P50995 505 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 RAD23AP54725 363 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ITGA1P56199 1179 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 CYP27A1Q02318 531 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SPDYAQ5MJ70 313 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 FASTKD5Q7L8L6 764 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 CCDC60Q8IWA6 550 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 SUGP1Q8IWZ8 645 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 ATL2Q8NHH9 583 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ZNF473Q8WTR7 871 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 GPKOWQ92917 476 aaPredicted RBP eCLIP5.35□□□□□ -1.55
SMG1-211ENST00000565324 PACSIN1Q9BY11 444 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TOPORSQ9NS56 1045 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 COPG2Q9UBF2 871 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ERBB4Q15303 1308 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 A0A0D9SFI3 127 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SPDYE5A6NIY4 337 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TNFAIP8O95379 198 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 UBE3CQ15386 1083 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TSC22D1Q15714 1073 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ANO4Q32M45 955 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SPDYE7PQ495Y7 208 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 LINC00301Q8NCQ3 95 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 CEP170P1Q96L14 293 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 C1orf50Q9BV19 199 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SERHL2Q9H4I8 314 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 SERHLQ9NQF3 203 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 ZKSCAN7Q9P0L1 754 aaPredicted RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 NXF1Q9UBU9 619 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 HEY1Q9Y5J3 304 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TLR2O60603 784 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 YY1P25490 414 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 BCAR1P56945 870 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 KYAT1Q16773 422 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TRMT5Q32P41 509 aaKnown RBP5.35□□□□□ -1.55
SMG1-211ENST00000565324 XXYLT1Q8NBI6 393 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 CLIC6Q96NY7 704 aa5.35□□□□□ -1.55
SMG1-211ENST00000565324 TRPC5OSA6NMA1 111 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 MTSS1O43312 755 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 SLC26A4O43511 780 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 CYTH3O43739 400 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 RCAN1P53805 252 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 PRKCQQ04759 706 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 SLC10A5Q5PT55 438 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 C7orf31Q8N865 590 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 ARHGEF26Q96DR7 871 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 MAGED2Q9UNF1 606 aaPredicted RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 GOLGA4Q13439 2230 aaKnown RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 PNMA6EA0A0J9YXQ4 647 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 INO80B-WBP1J3KQ70 363 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 RGS20O76081 388 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 ALDH18A1P54886 795 aaKnown RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 IDI1Q13907 227 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 ZMYM1Q5SVZ6 1142 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 RCSD1Q6JBY9 416 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 KRT78Q8N1N4 520 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 OR6P1Q8NGX9 317 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 ZNF564Q8TBZ8 553 aaPredicted RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 OTUD7AQ8TE49 926 aaPredicted RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 GLMNQ92990 594 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 FAM167AQ96KS9 214 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 INO80BQ9C086 356 aaPredicted RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 SLC52A2Q9HAB3 445 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 CNOT3O75175 753 aaKnown RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 MED26O95402 600 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 KRT17Q04695 432 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 TCP10Q12799 353 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 SFSWAPQ12872 951 aaKnown RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 PDAP1Q13442 181 aaKnown RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 SMYD4Q8IYR2 804 aaPredicted RBP5.34□□□□□ -1.55
SMG1-211ENST00000565324 FAM162AQ96A26 154 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 AP5M1Q9H0R1 490 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 OSBPL3Q9H4L5 887 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 GON4LQ3T8J9 2241 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 CIAO1O76071 339 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 PLA2G4BP0C869 781 aa5.34□□□□□ -1.55
SMG1-211ENST00000565324 AKAP5P24588 427 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms