RNA–Protein interactions for RNA: ENST00000565003.5

CMTM3-209, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-209ENST00000565003 CCDC195A0A1B0GUA6 201 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 MEFVO15553 781 aaPredicted RBP11.01□□□□□ -0.65
CMTM3-209ENST00000565003 BRD1O95696 1058 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 PLA2G4BP0C869 781 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 PLS3P13797 630 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 GRM5P41594 1212 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 OSTNP61366 133 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 FAM171A1Q5VUB5 890 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 BRAPQ7Z569 592 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 CEP57Q86XR8 500 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 GPR65Q8IYL9 337 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 ZDHHC14Q8IZN3 488 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 KCTD17Q8N5Z5 321 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 TMEM161BQ8NDZ6 487 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 CMASQ8NFW8 434 aaPredicted RBP11.01□□□□□ -0.65
CMTM3-209ENST00000565003 SPIRE2Q8WWL2 714 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 PBXIP1Q96AQ6 731 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 CDK5RAP3Q96JB5 506 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 AK8Q96MA6 479 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 MFSD14AQ96MC6 490 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 NTPCRQ9BSD7 190 aaKnown RBP11.01□□□□□ -0.65
CMTM3-209ENST00000565003 TTPALQ9BTX7 342 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 TIPINQ9BVW5 301 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.01□□□□□ -0.65
CMTM3-209ENST00000565003 FNIP2Q9P278 1114 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 LIMD1Q9UGP4 676 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 SORCS3Q9UPU3 1222 aa11.01□□□□□ -0.65
CMTM3-209ENST00000565003 RBM19Q9Y4C8 960 aaKnown RBP11.01□□□□□ -0.65
CMTM3-209ENST00000565003 MYO10Q9HD67 2058 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 SMIM28A0A1B0GU29 152 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 VPS37CA5D8V6 355 aaPredicted RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 TMEM189-UBE2V1I3L0A0 370 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 N4BP1O75113 896 aaKnown RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 B3GAT3O94766 335 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 CLCNKBP51801 687 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 CREMQ03060 361 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 SOX4Q06945 474 aaPredicted RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 MTMR3Q13615 1198 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 SF3A1Q15459 793 aaKnown RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 ARSHQ5FYA8 562 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 XKR4Q5GH76 650 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 LILRA6Q6PI73 481 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 MPZL3Q6UWV2 235 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 CD300LGQ6UXG3 332 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 ALKAL1Q6UXT8 129 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 APBB1IPQ7Z5R6 666 aaPredicted RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 C3orf58Q8NDZ4 430 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 LNX1Q8TBB1 728 aaPredicted RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 PIK3R5Q8WYR1 880 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 ZNF707Q96C28 371 aaPredicted RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 ZBTB45Q96K62 511 aaPredicted RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 SNX27Q96L92 541 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 ZMAT2Q96NC0 199 aaKnown RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 CLSTN3Q9BQT9 956 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 CCDC94Q9BW85 323 aaPredicted RBP11□□□□□ -0.65
CMTM3-209ENST00000565003 RHOBTB2Q9BYZ6 727 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 BLOC1S4Q9NUP1 217 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 KCND2Q9NZV8 630 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 ANKFY1Q9P2R3 1169 aa11□□□□□ -0.65
CMTM3-209ENST00000565003 MYH11P35749 1972 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 ADAM12O43184 909 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 SLC26A4O43511 780 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 PAPLNO95428 1278 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 BMP15O95972 392 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 C1RP00736 705 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 PDGFBP01127 241 aaPredicted RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 MAPTP10636 758 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 MCF2P10911 925 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 HARSP12081 509 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 PLCG1P19174 1290 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 FGFR3P22607 806 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 UBA7P41226 1012 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 YARSP54577 528 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 ELAVL2Q12926 359 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 STRN3Q13033 797 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 PSMD5Q16401 504 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 UPP1Q16831 310 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 SEZ6Q53EL9 994 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 ELMSAN1Q6PJG2 1045 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 OTOP3Q7RTS5 596 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 GPBP1Q86WP2 473 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 SUGP1Q8IWZ8 645 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 PLCD3Q8N3E9 789 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 FBXL6Q8N531 539 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 HDAC7Q8WUI4 952 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 SMG7Q92540 1137 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 ACSF2Q96CM8 615 aaPredicted RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 REEP2Q9BRK0 252 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 TCHPQ9BT92 498 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 PLEKHA4Q9H4M7 779 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 WDR6Q9NNW5 1121 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 TOPORSQ9NS56 1045 aaPredicted RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 DAXXQ9UER7 740 aaPredicted RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 DPP7Q9UHL4 492 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 FBXW11Q9UKB1 542 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 CLUHO75153 1309 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 KMT2EQ8IZD2 1858 aa10.99□□□□□ -0.65
CMTM3-209ENST00000565003 MTCL1Q9Y4B5 1905 aaKnown RBP10.99□□□□□ -0.65
CMTM3-209ENST00000565003 CITO14578 2027 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms