RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, human

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SIN3A-205	ENST00000564778	TRIM49C	P0CI26	452 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	SKI	P12755	728 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	ITGB8	P26012	769 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	CDC25B	P30305	580 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	PBX1	P40424	430 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	AP3M2	P53677	418 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	CCL23	P55773	120 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	WNT7B	P56706	349 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	KCNH2	Q12809	1159 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	FILIP1L	Q4L180	1135 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	SEZ6	Q53EL9	994 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	XKR4	Q5GH76	650 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	DCAF17	Q5H9S7	520 aa	Predicted RBP	10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	MFSD5	Q6N075	450 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	C15orf39	Q6ZRI6	1047 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	ZNF598	Q86UK7	904 aa	Known RBP	10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	NT5DC4	Q86YG4	428 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	WDR49	Q8IV35	697 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	TMEM192	Q8IY95	271 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	HACE1	Q8IYU2	909 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	RDH13	Q8NBN7	331 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	DBF4B	Q8NFT6	615 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	SCLY	Q96I15	445 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	SNX27	Q96L92	541 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	ACAP3	Q96P50	834 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	ERGIC2	Q96RQ1	377 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	TSPAN18	Q96SJ8	248 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	CGRRF1	Q99675	332 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	ADAM2	Q99965	735 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	TRIM5	Q9C035	493 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	VPS16	Q9H269	839 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	ASB7	Q9H672	318 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	RGS18	Q9NS28	235 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	TOPORS	Q9NS56	1045 aa	Predicted RBP	10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	SNTG2	Q9NY99	539 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	CNTN3	Q9P232	1028 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	C2CD2	Q9Y426	696 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	TTC3	P53804	2025 aa		10.68	□□□□□ -0.7
SIN3A-205	ENST00000564778	PTPRJ	Q12913	1337 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	ITIH6	Q6UXX5	1313 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	INPPL1	O15357	1258 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	TEX33	O43247	280 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	ADCY5	O95622	1261 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	PFKM	P08237	780 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	ATF7	P17544	494 aa	Predicted RBP	10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	FMO5	P49326	533 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	MXI1	P50539	228 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	YARS	P54577	528 aa	Known RBP	10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	DLG4	P78352	724 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	FAM189B	P81408	668 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	PPP3CA	Q08209	521 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	SLC10A6	Q3KNW5	377 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	TCERG1L	Q5VWI1	586 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	CNKSR3	Q6P9H4	555 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	ALKAL1	Q6UXT8	129 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	CHRDL2	Q6WN34	429 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	SLC24A5	Q71RS6	500 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	CREBRF	Q8IUR6	639 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	EFCAB13	Q8IY85	973 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	CCDC127	Q96BQ5	260 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	FNBP1	Q96RU3	617 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	TMEM8A	Q9HCN3	771 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	PDE11A	Q9HCR9	933 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	PRDM5	Q9NQX1	630 aa	Predicted RBP	10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	DERA	Q9Y315	318 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	COQ4	Q9Y3A0	265 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	HES2	Q9Y543	173 aa		10.67	□□□□□ -0.7
SIN3A-205	ENST00000564778	TRIP11	Q15643	1979 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	LACTBL1	A8MY62	500 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	SLC34A2	O95436	690 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	EOMES	O95936	686 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	DLAT	P10515	647 aa	Known RBP	10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	KCNE1	P15382	129 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	RAG1	P15918	1043 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	OSTN	P61366	133 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	PLCB2	Q00722	1185 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	UBXN1	Q04323	297 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	TCTN1	Q2MV58	587 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	ZACN	Q401N2	412 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	CBWD6	Q4V339	395 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	CBWD3	Q5JTY5	395 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	HABP4	Q5JVS0	413 aa	Known RBP	10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	CBWD5	Q5RIA9	395 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	FKBP15	Q5T1M5	1219 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	KRT39	Q6A163	491 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	ECHDC2	Q86YB7	292 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	VSTM4	Q8IW00	320 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	TMEM199	Q8N511	208 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	PDLIM2	Q96JY6	352 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	TMEM117	Q9H0C3	514 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	RNF39	Q9H2S5	420 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	ELAC1	Q9H777	363 aa	Known RBP	10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	UBN1	Q9NPG3	1134 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	PRKAG2	Q9UGJ0	569 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	COLQ	Q9Y215	455 aa	Predicted RBP	10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	SIK3	Q9Y2K2	1263 aa		10.66	□□□□□ -0.7
SIN3A-205	ENST00000564778	GIT1	Q9Y2X7	761 aa		10.66	□□□□□ -0.7

Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms