RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 LNX1Q8TBB1 728 aaPredicted RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 SMG7Q92540 1137 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 TMX3Q96JJ7 454 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 ACO2Q99798 780 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 MRPL4Q9BYD3 311 aaKnown RBP13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 KCNK12Q9HB15 430 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 PIDD1Q9HB75 910 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 PTPRHQ9HD43 1115 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 KMT5AQ9NQR1 393 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 ARHGAP28Q9P2N2 729 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 CLUHO75153 1309 aa13.39□□□□□ -0.27
GTF3C1-204ENST00000564664 CASTOR2A6NHX0 329 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 E9PMD0 336 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 H3BQV1 296 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 ZMYND10O75800 440 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 ASGR2P07307 311 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 MCF2P10911 925 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 GRM5P41594 1212 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 SMTNP53814 917 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 ATP2C1P98194 919 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 IL17AQ16552 155 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 XKR4Q5GH76 650 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 RTP2Q5QGT7 225 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 ASTLQ6HA08 431 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 CEP57Q86XR8 500 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 SPIRE2Q8WWL2 714 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 ZNF707Q96C28 371 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 PPP1R10Q96QC0 940 aaKnown RBP13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 CLSTN3Q9BQT9 956 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 PAAF1Q9BRP4 392 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 MFSD1Q9H3U5 465 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 SLC38A7Q9NVC3 462 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 DUSP12Q9UNI6 340 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 GDAQ9Y2T3 454 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 CACNA1HO95180 2353 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 WDFY4Q6ZS81 3184 aa13.38□□□□□ -0.27
GTF3C1-204ENST00000564664 SMIM28A0A1B0GU29 152 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 H0YCG3 227 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 GALR2O43603 387 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 HIP1RO75146 1068 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 RFPL2O75678 378 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 B3GAT3O94766 335 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 KIF4AO95239 1232 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 POU2F2P09086 479 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 SPATA31D3P0C874 917 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 FGFR3P22607 806 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 HOXA9P31269 272 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 GBP2P32456 591 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 VCPP55072 806 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 TCF15Q12870 199 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 RAB33AQ14088 237 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 PSMD5Q16401 504 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 UPP1Q16831 310 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 SPATA31D4Q6ZUB0 917 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 SYT2Q8N9I0 419 aaPredicted RBP13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 RABGGTAQ92696 567 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 KCNN1Q92952 543 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 B3GALT6Q96L58 329 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 AK8Q96MA6 479 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 ACAP3Q96P50 834 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 MMTAG2Q9BU76 263 aaKnown RBP13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 KIFC3Q9BVG8 833 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 WNT16Q9UBV4 365 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 FBXW11Q9UKB1 542 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 BACE2Q9Y5Z0 518 aa13.37□□□□□ -0.27
GTF3C1-204ENST00000564664 DENND4AQ7Z401 1863 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 XYLBO75191 536 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 BMP15O95972 392 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 EDN1P05305 212 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 PLS3P13797 630 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 KCNE1P15382 129 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 PROZP22891 400 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 GJB2P29033 226 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 CDC25AP30304 524 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 STRN3Q13033 797 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 LIN9Q5TKA1 542 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 PRSS55Q6UWB4 352 aaPredicted RBP13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 MPZL3Q6UWV2 235 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 ANKS3Q6ZW76 656 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 DAW1Q8N136 415 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 CDK5RAP3Q96JB5 506 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 TCHPQ9BT92 498 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 RUSC1Q9BVN2 902 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 POLD4Q9HCU8 107 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 USP20Q9Y2K6 914 aa13.36□□□□□ -0.27
GTF3C1-204ENST00000564664 PP2D1A8MPX8 630 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 TOM1L1O75674 476 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 PDGFBP01127 241 aaPredicted RBP13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 LAMP2P13473 410 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 RPL17P18621 184 aaKnown RBP13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 ABCD1P33897 745 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 CLCNKBP51801 687 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 MAPK7Q13164 816 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 ZNF568Q3ZCX4 644 aa13.35□□□□□ -0.27
GTF3C1-204ENST00000564664 PPM1LQ5SGD2 360 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms