RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 LIG4P49917 911 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 PKP1Q13835 747 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 NOLC1Q14978 699 aaKnown RBP eCLIP20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 ATL3Q6DD88 541 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 FUT10Q6P4F1 479 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 PDILTQ8N807 584 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 DDX12PQ92771 950 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 CACNG4Q9UBN1 327 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 CFAP45Q9UL16 551 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 TBX20Q9UMR3 447 aa20.08■□□□□ 0.81
SYNGR3-204ENST00000564642 ABLIM1O14639 778 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 CUTAO60888 179 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 TPRNQ4KMQ1 711 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 GLRA4Q5JXX5 417 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 ADHFE1Q8IWW8 467 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 RNF168Q8IYW5 571 aaPredicted RBP20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 GJD3Q8N144 294 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 KCNG4Q8TDN1 519 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 KCNN1Q92952 543 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 KLHL5Q96PQ7 755 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 PAAF1Q9BRP4 392 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 APOL5Q9BWW9 433 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 GPR62Q9BZJ7 368 aa20.07■□□□□ 0.8
SYNGR3-204ENST00000564642 SMIM28A0A1B0GU29 152 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 MYMKA6NI61 221 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 HNRNPDLO14979 420 aaKnown RBP20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 LILRB3O75022 631 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 EFEMP2O95967 443 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 CNPP09543 421 aaKnown RBP20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 NMT1P30419 496 aaKnown RBP20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 MCL1Q07820 350 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 NAB2Q15742 525 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 USP41Q3LFD5 358 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 KIAA0319Q5VV43 1072 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 ALKAL1Q6UXT8 129 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 HASPINQ8TF76 798 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 PPP1R10Q96QC0 940 aaKnown RBP20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 POP1Q99575 1024 aaKnown RBP20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 SLC38A7Q9NVC3 462 aa20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 USP15Q9Y4E8 981 aaPredicted RBP20.06■□□□□ 0.8
SYNGR3-204ENST00000564642 SF3B1O75533 1304 aaKnown RBP eCLIP20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 A0A087X0B3 334 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 GTF2BQ00403 316 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 DSG1Q02413 1049 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 ZP2Q05996 745 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 XKR4Q5GH76 650 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 CES5AQ6NT32 575 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 SYCE2Q6PIF2 218 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 SFR1Q86XK3 245 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 SLC22A17Q8WUG5 538 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 UROC1Q96N76 676 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 S1PR5Q9H228 398 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 CD320Q9NPF0 282 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 CHST7Q9NS84 486 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 DZANK1Q9NVP4 752 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 SEL1LQ9UBV2 794 aa20.05■□□□□ 0.8
SYNGR3-204ENST00000564642 SPDYE4A6NLX3 237 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 KIF4AO95239 1232 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 ADH1AP07327 375 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 IDEP14735 1019 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 EPCAMP16422 314 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 GAP43P17677 238 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 ME1P48163 572 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 DNM1Q05193 864 aaKnown RBP20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 ELAVL2Q12926 359 aaKnown RBP20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 SEZ6Q53EL9 994 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 FIZ1Q96SL8 496 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 LRRC27Q9C0I9 530 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 ST6GALNAC4Q9H4F1 302 aa20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 MRPL44Q9H9J2 332 aaKnown RBP20.04■□□□□ 0.8
SYNGR3-204ENST00000564642 B3GAT3O94766 335 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 PIGRP01833 764 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 KCNE1P15382 129 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 CLCN4P51793 760 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 CLCNKBP51801 687 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 ITIH3Q06033 890 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 BECN1Q14457 450 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 KYAT1Q16773 422 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 ZC2HC1CQ53FD0 456 aaPredicted RBP20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 DCLRE1AQ6PJP8 1040 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 SHC4Q6S5L8 630 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 ZNF720Q7Z2F6 126 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 CEP57Q86XR8 500 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 GPR65Q8IYL9 337 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 IQUBQ8NA54 791 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 RIN2Q8WYP3 895 aaPredicted RBP20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 DHX58Q96C10 678 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 DNAJC19Q96DA6 116 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 DDX27Q96GQ7 796 aaKnown RBP20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 B3GALT6Q96L58 329 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 CUEDC2Q9H467 287 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 RXFP1Q9HBX9 757 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 FAM13BQ9NYF5 915 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 CNTN3Q9P232 1028 aa20.03■□□□□ 0.8
SYNGR3-204ENST00000564642 C19orf67A6NJJ6 358 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 TEX28O15482 410 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 CLTAP09496 248 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 AMPD3Q01432 767 aa20.02■□□□□ 0.8
SYNGR3-204ENST00000564642 CREMQ03060 361 aa20.02■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms