RNA–Protein interactions for RNA: ENST00000564638.1

MAP1LC3B-205, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 2

Gene MAP1LC3B, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-205ENST00000564638 SIX2Q9NPC8 291 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GPRC5CQ9NQ84 441 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 KMT5AQ9NQR1 393 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SETD4Q9NVD3 440 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ERAP1Q9NZ08 941 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HSPBP1Q9NZL4 362 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GTF2IRD1Q9UHL9 959 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 WDFY4Q6ZS81 3184 aa8.05□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CHD9Q3L8U1 2897 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 NCOR1O75376 2440 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CACNA1AO00555 2505 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 DENND3A2RUS2 1198 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRIM43BA6NCK2 446 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RCCD1A6NED2 376 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ZNF862O60290 1169 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GFPT2O94808 682 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ATG7O95352 703 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CD4P01730 458 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 OATP04181 439 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 H2AFXP16104 143 aaPredicted RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SCP2P22307 547 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PRKCIP41743 596 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 NPTX2P47972 431 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 POLGP54098 1239 aaPredicted RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 JAM2P57087 298 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 APBA1Q02410 837 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ARID5AQ03989 594 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PTPN11Q06124 597 aaPredicted RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GFPT1Q06210 699 aaPredicted RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 EMC2Q15006 297 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PLCB4Q15147 1175 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GRIK4Q16099 956 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ENOX2Q16206 610 aaKnown RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 MTERF2Q49AM1 385 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PAPD7Q5XG87 772 aaKnown RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 IQCEQ6IPM2 695 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 DPY19L2P1Q6NXN4 242 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 FBXO38Q6PIJ6 1188 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 USP37Q86T82 979 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 MAP4K3Q8IVH8 894 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RNF10Q8N5U6 811 aaKnown RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TMEM161BQ8NDZ6 487 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CAGE1Q8TC20 777 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRAPPC12Q8WVT3 735 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TRIM43Q96BQ3 446 aaPredicted RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RPGRIP1Q96KN7 1286 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 FAM167AQ96KS9 214 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TOX2Q96NM4 488 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 NOX5Q96PH1 765 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 LBHD1Q9BQE6 289 aaPredicted RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SH2D3AQ9BRG2 576 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CCDC94Q9BW85 323 aaPredicted RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 IKZF4Q9H2S9 585 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HIPK3Q9H422 1215 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PCIF1Q9H4Z3 704 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CYP26B1Q9NR63 512 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PUF60Q9UHX1 559 aaKnown RBP8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TBX20Q9UMR3 447 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TFR2Q9UP52 801 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SAR1BQ9Y6B6 198 aa8.04□□□□□ -1.12
MAP1LC3B-205ENST00000564638 LTBP2Q14767 1821 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SCN5AQ14524 2016 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 IGKV6D-21A0A0A0MT36 114 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 F8VZ95 297 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TREHO43280 583 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HBP1O60381 514 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 STBD1O95210 358 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 MOCS3O95396 460 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ATP1A1P05023 1023 aaKnown RBP8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 GNAT1P11488 350 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 INSRRP14616 1297 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CYP2C18P33260 490 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SOX5P35711 763 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 RFC5P40937 340 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 MXI1P50539 228 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 NAP1L1P55209 391 aaKnown RBP8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CCL23P55773 120 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HIC1Q14526 733 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 IFI16Q16666 785 aaKnown RBP8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TMCO3Q6UWJ1 677 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PLPPR4Q7Z2D5 763 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 SESTD1Q86VW0 696 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 AFAP1L1Q8TED9 768 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ATP8B4Q8TF62 1192 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 LMBR1Q8WVP7 490 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 BSNDQ8WZ55 320 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 BADQ92934 168 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 ZBTB10Q96DT7 871 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 BICD1Q96G01 975 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CBWD1Q9BRT8 395 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 STK33Q9BYT3 514 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 XPNPEP1Q9NQW7 623 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 APEX2Q9UBZ4 518 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 DNAJC12Q9UKB3 198 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 TBX21Q9UL17 535 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 JRKLQ9Y4A0 524 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 HYOU1Q9Y4L1 999 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 PPME1Q9Y570 386 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 CAPN6Q9Y6Q1 641 aa8.03□□□□□ -1.12
MAP1LC3B-205ENST00000564638 UMODL1Q5DID0 1318 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms