RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 LDHAP00338 332 aaKnown RBP13.57□□□□□ -0.24
KARS-204ENST00000564578 POMCP01189 267 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 CA3P07451 260 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 NR2F2P24468 414 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 SCNN1GP51170 649 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 SMAD3P84022 425 aaKnown RBP13.57□□□□□ -0.24
KARS-204ENST00000564578 STIM1Q13586 685 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 MYBPC2Q14324 1141 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 NAB2Q15742 525 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 KYAT1Q16773 422 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 SPRED2Q7Z698 418 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 ZNF280BQ86YH2 543 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 ZC3H3Q8IXZ2 948 aaKnown RBP13.57□□□□□ -0.24
KARS-204ENST00000564578 CMTR2Q8IYT2 770 aaKnown RBP13.57□□□□□ -0.24
KARS-204ENST00000564578 ABI1Q8IZP0 508 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 RDH13Q8NBN7 331 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 FUCA2Q9BTY2 467 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 GZF1Q9H116 711 aaPredicted RBP13.57□□□□□ -0.24
KARS-204ENST00000564578 TOPORSQ9NS56 1045 aaPredicted RBP13.57□□□□□ -0.24
KARS-204ENST00000564578 TBC1D13Q9NVG8 400 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 CNTN3Q9P232 1028 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 CTNND2Q9UQB3 1225 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 TRANK1O15050 2925 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 TRIP11Q15643 1979 aa13.57□□□□□ -0.24
KARS-204ENST00000564578 SMIM28A0A1B0GU29 152 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 SYCE3A1L190 88 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 LACTBL1A8MY62 500 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 AKAP3O75969 853 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 DDHD2O94830 711 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 YARSP54577 528 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 STX17P56962 302 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 POU5F1Q01860 360 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 LRRC63Q05C16 580 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 PAK1Q13153 545 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 ADAM9Q13443 819 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 BTG3Q14201 252 aaPredicted RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 SNRNP35Q16560 246 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 ZSCAN23Q3MJ62 389 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 GLRA4Q5JXX5 417 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 FOXR2Q6PJQ5 311 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 SASS6Q6UVJ0 657 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 CWH43Q9H720 699 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 RPF1Q9H9Y2 349 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 PLEKHA5Q9HAU0 1116 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 GBF1Q92538 1859 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 LINC01553A4QN01 128 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 ZNF233A6NK53 670 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 SOX1O00570 391 aaPredicted RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 EXOC3O60645 756 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 KCNE1P15382 129 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 BRD2P25440 801 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 DNAJB2P25686 324 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 TYRO3Q06418 890 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 SPAG1Q07617 926 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 ZBTB6Q15916 424 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 BRSK2Q8IWQ3 736 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 RSPH1Q8WYR4 309 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 CLP1Q92989 425 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 PPP1R10Q96QC0 940 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 KIAA1586Q9HCI6 787 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 RBAKQ9NYW8 714 aaPredicted RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 RWDD2AQ9UIY3 292 aa13.56□□□□□ -0.24
KARS-204ENST00000564578 MRPL42Q9Y6G3 142 aaKnown RBP13.56□□□□□ -0.24
KARS-204ENST00000564578 CITO14578 2027 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 FKBP3Q00688 224 aaKnown RBP13.55□□□□□ -0.24
KARS-204ENST00000564578 SOX4Q06945 474 aaPredicted RBP13.55□□□□□ -0.24
KARS-204ENST00000564578 DSC1Q08554 894 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 C11orf57Q6ZUT1 292 aaPredicted RBP13.55□□□□□ -0.24
KARS-204ENST00000564578 TMEM130Q8N3G9 435 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 PLEKHO2Q8TD55 490 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 NOC3LQ8WTT2 800 aaKnown RBP13.55□□□□□ -0.24
KARS-204ENST00000564578 BORCS6Q96GS4 357 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 MFSD14AQ96MC6 490 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 NRDE2Q9H7Z3 1164 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 PDE11AQ9HCR9 933 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 KANSL3Q9P2N6 904 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 DNAJB4Q9UDY4 337 aa13.55□□□□□ -0.24
KARS-204ENST00000564578 LETM1O95202 739 aaPredicted RBP13.54□□□□□ -0.24
KARS-204ENST00000564578 THP07101 528 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 RPL13P26373 211 aaKnown RBP13.54□□□□□ -0.24
KARS-204ENST00000564578 ERCC5P28715 1186 aaPredicted RBP13.54□□□□□ -0.24
KARS-204ENST00000564578 TAP1Q03518 808 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 CYP24A1Q07973 514 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 CEP135Q66GS9 1140 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 LRRC43Q8N309 656 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 FAM212AQ96EL1 285 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 FAM84AQ96KN4 292 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 MRPL9Q9BYD2 267 aaKnown RBP13.54□□□□□ -0.24
KARS-204ENST00000564578 ASB7Q9H672 318 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 ANO10Q9NW15 660 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 CACNG4Q9UBN1 327 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 BICDL2A1A5D9 508 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 NFICP08651 508 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 PBX3P40426 434 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 PPP2R3AQ06190 1150 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 GRIK3Q13003 919 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 RAB30Q15771 203 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 STX1AQ16623 288 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 JADE1Q6IE81 842 aa13.54□□□□□ -0.24
KARS-204ENST00000564578 EFCAB13Q8IY85 973 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms