RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 NRG4Q8WWG1 115 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 JADE3Q92613 823 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 FAXDC2Q96IV6 333 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 DCLRE1CQ96SD1 692 aaKnown RBP6.53□□□□□ -1.36
UBR1-205ENST00000564540 MRI1Q9BV20 369 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 SLC46A2Q9BY10 475 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 TUBD1Q9UJT1 453 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 INTUQ9ULD6 942 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 FZD1Q9UP38 647 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 PCDHGA9Q9Y5G4 932 aaKnown RBP6.53□□□□□ -1.36
UBR1-205ENST00000564540 PCDHGA8Q9Y5G5 932 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 PCDHGA7Q9Y5G6 932 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 PCDHGA6Q9Y5G7 932 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 PCDHGA3Q9Y5H0 932 aa6.53□□□□□ -1.36
UBR1-205ENST00000564540 DRGXA6NNA5 263 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 GABRDO14764 452 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 LPXNO60711 386 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 ENDOD1O94919 500 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 SNRPA1P09661 255 aaKnown RBP6.52□□□□□ -1.37
UBR1-205ENST00000564540 RBP3P10745 1247 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 IL2RBP14784 551 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 MGAT1P26572 445 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 PDCD4Q53EL6 469 aaKnown RBP6.52□□□□□ -1.37
UBR1-205ENST00000564540 RRP12Q5JTH9 1297 aaKnown RBP6.52□□□□□ -1.37
UBR1-205ENST00000564540 GJC2Q5T442 439 aaPredicted RBP6.52□□□□□ -1.37
UBR1-205ENST00000564540 FAM102AQ5T9C2 384 aaPredicted RBP6.52□□□□□ -1.37
UBR1-205ENST00000564540 Q6ZPA2 131 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 SYNE4Q8N205 404 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 ZGPATQ8N5A5 531 aaKnown RBP6.52□□□□□ -1.37
UBR1-205ENST00000564540 AMER2Q8N7J2 671 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 PROKR1Q8TCW9 393 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 LENG9Q96B70 501 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 MYOCQ99972 504 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 AKIP1Q9NQ31 210 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 ACTL7AQ9Y615 435 aa6.52□□□□□ -1.37
UBR1-205ENST00000564540 XPOTO43592 962 aaKnown RBP6.51□□□□□ -1.37
UBR1-205ENST00000564540 NDUFS2O75306 463 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 AMY1AP04745 511 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 ITGB1P05556 798 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 KRT4P19013 534 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 C5AR1P21730 350 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 PCBP2Q15366 365 aaKnown RBP eCLIP6.51□□□□□ -1.37
UBR1-205ENST00000564540 LRRC55Q6ZSA7 311 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 LDLRAD3Q86YD5 345 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 VRK3Q8IV63 474 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 RPUSD2Q8IZ73 545 aaKnown RBP6.51□□□□□ -1.37
UBR1-205ENST00000564540 RAB24Q969Q5 203 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 IKZF4Q9H2S9 585 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 PCDH12Q9NPG4 1184 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 TMEM140Q9NV12 185 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 MOCS1Q9NZB8 636 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 SLC23A1Q9UHI7 598 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 RUVBL1Q9Y265 456 aaKnown RBP6.51□□□□□ -1.37
UBR1-205ENST00000564540 USP15Q9Y4E8 981 aaPredicted RBP6.51□□□□□ -1.37
UBR1-205ENST00000564540 COL4A3BPQ9Y5P4 624 aa6.51□□□□□ -1.37
UBR1-205ENST00000564540 FAM171A2A8MVW0 826 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 FZD9O00144 591 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 RNASET2O00584 256 aaKnown RBP6.5□□□□□ -1.37
UBR1-205ENST00000564540 GPR32O75388 356 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 NDUFA10O95299 355 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 LAG3P18627 525 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 ATP5JP18859 108 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 TGFB2P61812 414 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 DPTQ07507 201 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 TIGD2Q4W5G0 525 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 KCNV1Q6PIU1 500 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 MED25Q71SY5 747 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 RHOT1Q8IXI2 618 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.5□□□□□ -1.37
UBR1-205ENST00000564540 CHFRQ96EP1 664 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 HS3ST4Q9Y661 456 aa6.5□□□□□ -1.37
UBR1-205ENST00000564540 CENPVL1A0A0U1RR11 272 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 KLHL33A6NCF5 533 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 ABHD16AO95870 558 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 MTM1Q13496 603 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 ZNF529Q6P280 563 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 PLXDC1Q8IUK5 500 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 ULK2Q8IYT8 1036 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 SSH1Q8WYL5 1049 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 MYEOVQ96EZ4 313 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 FUBP3Q96I24 572 aaKnown RBP eCLIP6.49□□□□□ -1.37
UBR1-205ENST00000564540 C7orf25Q9BPX7 421 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 MAP3K2Q9Y2U5 619 aa6.49□□□□□ -1.37
UBR1-205ENST00000564540 SHTN1A0MZ66 631 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 ALG1L2C9J202 215 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 DIRC3C9JPN6 131 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 SLC6A2P23975 617 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 BEAN1Q3B7T3 259 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 LY6G5CQ5SRR4 150 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 AGAP9Q5VTM2 703 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 OTUD7BQ6GQQ9 843 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 UBE3BQ7Z3V4 1068 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 DRC7Q8IY82 874 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 CASKIN2Q8WXE0 1202 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 CYFIP2Q96F07 1278 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 TEKT5Q96M29 485 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 TTPALQ9BTX7 342 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 FBXO34Q9NWN3 711 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 ANKFY1Q9P2R3 1169 aa6.48□□□□□ -1.37
UBR1-205ENST00000564540 LIMCH1Q9UPQ0 1083 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms