RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 CES5AQ6NT32 575 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 PRSS33Q8NF86 280 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 RASSF8Q8NHQ8 419 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 EMILIN2Q9BXX0 1053 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 CCSER1Q9C0I3 900 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 CHST7Q9NS84 486 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 STK39Q9UEW8 545 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 ADAM28Q9UKQ2 775 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 SRPRBQ9Y5M8 271 aaKnown RBP13.92□□□□□ -0.18
HERC2-206ENST00000564519 WDFY4Q6ZS81 3184 aa13.92□□□□□ -0.18
HERC2-206ENST00000564519 TEX28O15482 410 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 TADA2AO75478 443 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 HARSP12081 509 aaKnown RBP13.91□□□□□ -0.18
HERC2-206ENST00000564519 SP100P23497 879 aaPredicted RBP13.91□□□□□ -0.18
HERC2-206ENST00000564519 KLRC2P26717 231 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 GRM5P41594 1212 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 GLUD2P49448 558 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 NCKAP1LP55160 1127 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 PTPN21Q16825 1174 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 FOXD4L5Q5VV16 416 aaPredicted RBP13.91□□□□□ -0.18
HERC2-206ENST00000564519 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 HSCBQ8IWL3 235 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 FOXD4L4Q8WXT5 416 aaPredicted RBP13.91□□□□□ -0.18
HERC2-206ENST00000564519 ATOH1Q92858 354 aaPredicted RBP13.91□□□□□ -0.18
HERC2-206ENST00000564519 PPP1R10Q96QC0 940 aaKnown RBP13.91□□□□□ -0.18
HERC2-206ENST00000564519 HAPLN2Q9GZV7 340 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 ADAM7Q9H2U9 754 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 GOLGA2P5Q9HBQ8 144 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 RXFP1Q9HBX9 757 aa13.91□□□□□ -0.18
HERC2-206ENST00000564519 SMIM28A0A1B0GU29 152 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 BRD1O95696 1058 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 MYBP10242 640 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 MCF2P10911 925 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 DDIT3P35638 169 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 ZNF131P52739 623 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 SMTNP53814 917 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 STRN3Q13033 797 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 SLC39A14Q15043 492 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 SEZ6Q53EL9 994 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 XKR4Q5GH76 650 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 RTP2Q5QGT7 225 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 PRSS55Q6UWB4 352 aaPredicted RBP13.9□□□□□ -0.18
HERC2-206ENST00000564519 CD300LGQ6UXG3 332 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 ALKAL1Q6UXT8 129 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 PPFIBP1Q86W92 1011 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 RIN2Q8WYP3 895 aaPredicted RBP13.9□□□□□ -0.18
HERC2-206ENST00000564519 LARP4BQ92615 738 aaKnown RBP13.9□□□□□ -0.18
HERC2-206ENST00000564519 ZMAT2Q96NC0 199 aaKnown RBP13.9□□□□□ -0.18
HERC2-206ENST00000564519 NECTIN4Q96NY8 510 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 FIZ1Q96SL8 496 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 TCHPQ9BT92 498 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 ZSCAN16Q9H4T2 348 aaPredicted RBP13.9□□□□□ -0.18
HERC2-206ENST00000564519 POMKQ9H5K3 350 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 ANKFY1Q9P2R3 1169 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 ODF2LQ9ULJ1 636 aa13.9□□□□□ -0.18
HERC2-206ENST00000564519 FAM13AO94988 1023 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 KRT18P05783 430 aaKnown RBP13.89□□□□□ -0.19
HERC2-206ENST00000564519 RPL17P18621 184 aaKnown RBP13.89□□□□□ -0.19
HERC2-206ENST00000564519 NASPP49321 788 aaPredicted RBP13.89□□□□□ -0.19
HERC2-206ENST00000564519 CLCNKBP51801 687 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 SOX4Q06945 474 aaPredicted RBP13.89□□□□□ -0.19
HERC2-206ENST00000564519 USP41Q3LFD5 358 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 KIAA1841Q6NSI8 718 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 TMC5Q6UXY8 1006 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 HAUS6Q7Z4H7 955 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 APBB1IPQ7Z5R6 666 aaPredicted RBP13.89□□□□□ -0.19
HERC2-206ENST00000564519 TMEM130Q8N3G9 435 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 MYCT1Q8N699 235 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 SPRYD3Q8NCJ5 442 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 SNX27Q96L92 541 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 PHOX2BQ99453 314 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 CCDC94Q9BW85 323 aaPredicted RBP13.89□□□□□ -0.19
HERC2-206ENST00000564519 ZHX3Q9H4I2 956 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 PARVGQ9HBI0 331 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 DZANK1Q9NVP4 752 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 LARSQ9P2J5 1176 aaKnown RBP13.89□□□□□ -0.19
HERC2-206ENST00000564519 SSX2IPQ9Y2D8 614 aa13.89□□□□□ -0.19
HERC2-206ENST00000564519 A0A087X0B3 334 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 SPDYE4A6NLX3 237 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 K7ENM7 598 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 TOM1L1O75674 476 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 SPATA31D3P0C874 917 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 NMT1P30419 496 aaKnown RBP13.88□□□□□ -0.19
HERC2-206ENST00000564519 AVPR2P30518 371 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 YARSP54577 528 aaKnown RBP13.88□□□□□ -0.19
HERC2-206ENST00000564519 ITIH3Q06033 890 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 MTMR3Q13615 1198 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 NOLC1Q14978 699 aaKnown RBP eCLIP13.88□□□□□ -0.19
HERC2-206ENST00000564519 FOXD4L6Q3SYB3 417 aaPredicted RBP13.88□□□□□ -0.19
HERC2-206ENST00000564519 FAM171A1Q5VUB5 890 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 RRAGBQ5VZM2 374 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 FOXD4L3Q6VB84 417 aaPredicted RBP13.88□□□□□ -0.19
HERC2-206ENST00000564519 ZPBP2Q6X784 338 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 SPATA31D4Q6ZUB0 917 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 PALB2Q86YC2 1186 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 GLYCTKQ8IVS8 523 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 C3orf58Q8NDZ4 430 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 KCNN1Q92952 543 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 RIPOR3Q96MK2 946 aa13.88□□□□□ -0.19
HERC2-206ENST00000564519 ACAP3Q96P50 834 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms