RNA–Protein interactions for RNA: ENST00000564390.1

AC009041.3-201, humanhuman

TSL 5 BASIC

Gene AC009041.3, Length 879 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.3-201ENST00000564390 SSX2IPQ9Y2D8 614 aa27.73■■■□□ 2.03
AC009041.3-201ENST00000564390 STX6O43752 255 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 ADH1AP07327 375 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 USP41Q3LFD5 358 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 CLIC6Q96NY7 704 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 PPP1R10Q96QC0 940 aaKnown RBP27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 SFXN1Q9H9B4 322 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 GOLGA2P5Q9HBQ8 144 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 RXFP1Q9HBX9 757 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 MAN1C1Q9NR34 630 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 ODF2LQ9ULJ1 636 aa27.72■■■□□ 2.03
AC009041.3-201ENST00000564390 MYH15Q9Y2K3 1946 aa27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 MCF2P10911 925 aa27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 RPL17P18621 184 aaKnown RBP27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 YARSP54577 528 aaKnown RBP27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 HERC4Q5GLZ8 1057 aaPredicted RBP27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 RTP2Q5QGT7 225 aa27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 PRSS55Q6UWB4 352 aaPredicted RBP27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 RIPOR3Q96MK2 946 aa27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 USP28Q96RU2 1077 aa27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 LARSQ9P2J5 1176 aaKnown RBP27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 TRIP11Q15643 1979 aa27.71■■■□□ 2.03
AC009041.3-201ENST00000564390 FAM13AO94988 1023 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 KRT18P05783 430 aaKnown RBP27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 IGFBP6P24592 240 aaPredicted RBP27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 MTHFRP42898 656 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 NCKAP1LP55160 1127 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 SEZ6Q53EL9 994 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 LARP4BQ92615 738 aaKnown RBP27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 SNX21Q969T3 373 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 SNX27Q96L92 541 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 NECTIN4Q96NY8 510 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 CCSER1Q9C0I3 900 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 ZHX3Q9H4I2 956 aa27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 TOPORSQ9NS56 1045 aaPredicted RBP27.7■■■□□ 2.02
AC009041.3-201ENST00000564390 SMIM28A0A1B0GU29 152 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 GLUD1P00367 558 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 SPATA31D3P0C874 917 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 NOLC1Q14978 699 aaKnown RBP eCLIP27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 FAM171A1Q5VUB5 890 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 SPATA31D4Q6ZUB0 917 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 HAUS6Q7Z4H7 955 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 CEP57Q86XR8 500 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 PALB2Q86YC2 1186 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 MYCT1Q8N699 235 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 BICD1Q96G01 975 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 SRPRBQ9Y5M8 271 aaKnown RBP27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 DENND4AQ7Z401 1863 aa27.69■■■□□ 2.02
AC009041.3-201ENST00000564390 C2orf16Q68DN1 1984 aa27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 K7ENM7 598 aa27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 MEFVO15553 781 aaPredicted RBP27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 TOM1L1O75674 476 aa27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 BRD1O95696 1058 aa27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 CLCNKBP51801 687 aa27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 SOX4Q06945 474 aaPredicted RBP27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 HSCBQ8IWL3 235 aa27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 KCNG1Q9UIX4 513 aa27.68■■■□□ 2.02
AC009041.3-201ENST00000564390 C2CD4DB7Z1M9 353 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 TBCAO75347 108 aaKnown RBP27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 MATR3P43243 847 aaKnown RBP eCLIP27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 ZNF131P52739 623 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 ATAT1Q5SQI0 421 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 FOXD4L5Q5VV16 416 aaPredicted RBP27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 ZPBP2Q6X784 338 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 FOXD4L4Q8WXT5 416 aaPredicted RBP27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 ZMAT2Q96NC0 199 aaKnown RBP27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 ACAP3Q96P50 834 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 TTPALQ9BTX7 342 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 HAPLN2Q9GZV7 340 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 ZSCAN16Q9H4T2 348 aaPredicted RBP27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 PARVGQ9HBI0 331 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 VWA8A3KMH1 1905 aa27.67■■■□□ 2.02
AC009041.3-201ENST00000564390 B3GAT3O94766 335 aa27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 XKR4Q5GH76 650 aa27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 ALKAL1Q6UXT8 129 aa27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 GPR149Q86SP6 731 aa27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 C3orf58Q8NDZ4 430 aa27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 FNIP2Q9P278 1114 aa27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 DAXXQ9UER7 740 aaPredicted RBP27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 NR2E1Q9Y466 385 aa27.66■■■□□ 2.02
AC009041.3-201ENST00000564390 CITO14578 2027 aa27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 PRR33A8MZF0 331 aa27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 H0YCG3 227 aa27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 I3L4J1 428 aa27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 PSMD5Q16401 504 aa27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 C18orf25Q96B23 403 aaPredicted RBP27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 CNTN3Q9P232 1028 aa27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 CCDC39Q9UFE4 941 aa27.65■■■□□ 2.02
AC009041.3-201ENST00000564390 CLDN3O15551 220 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 TGM5O43548 720 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 RFPL2O75678 378 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 DDIT3P35638 169 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 TXLNAP40222 546 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 CREMQ03060 361 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 MCL1Q07820 350 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 SLC39A14Q15043 492 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 UPP1Q16831 310 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 CD300LGQ6UXG3 332 aa27.64■■■□□ 2.02
AC009041.3-201ENST00000564390 PIK3R5Q8WYR1 880 aa27.64■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms