RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 MARCH11A6NNE9 402 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 LMNAP02545 664 aaKnown RBP4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 VIL1P09327 827 aaKnown RBP4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 SNRPA1P09661 255 aaKnown RBP4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 RAP2AP10114 183 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 DDX6P26196 483 aaKnown RBP eCLIP4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 ADRA1BP35368 520 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 PER3P56645 1201 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 GUCY1B3Q02153 619 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 SP140Q13342 867 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 TP53BP2Q13625 1128 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 ANO4Q32M45 955 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 AGAP9Q5VTM2 703 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 ZNF575Q86XF7 245 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 SPATS2Q86XZ4 545 aaKnown RBP4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 WDR66Q8TBY9 1149 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 STON2Q8WXE9 905 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 MRI1Q9BV20 369 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 ADI1Q9BV57 179 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 TOR3AQ9H497 397 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 LANCL2Q9NS86 450 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 DNAJC28Q9NX36 388 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 FPGT-TNNI3KV9GXZ4 949 aa4.62□□□□□ -1.67
HMGB1P33-201ENST00000563485 PPFIA2O75334 1257 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 SPDEFO95238 335 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 CPEP16870 476 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 FPR1P21462 350 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 GUCY1A2P33402 732 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 MCAMP43121 646 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 ALDH1A3P47895 512 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 MTNR1BP49286 362 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 USP14P54578 494 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 ERVK-21P61565 698 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 FAPQ12884 760 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 MALLQ13021 153 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 RESTQ13127 1097 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 SEPT2Q15019 361 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 NOMO1Q15155 1222 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 RRP12Q5JTH9 1297 aaKnown RBP4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 FAM180AQ6UWF9 173 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 MED25Q71SY5 747 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 RHOT2Q8IXI1 618 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 CMTR2Q8IYT2 770 aaKnown RBP4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 LCORLQ8N3X6 602 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 OR56A1Q8NGH5 318 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 ASB10Q8WXI3 467 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 SENP6Q9GZR1 1112 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 SYBUQ9NX95 663 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 AJAP1Q9UKB5 411 aaPredicted RBP4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 ZBTB21Q9ULJ3 1066 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 ATP11BQ9Y2G3 1177 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 PCDHGA2Q9Y5H1 932 aa4.61□□□□□ -1.67
HMGB1P33-201ENST00000563485 NUDT3O95989 172 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 CFIP05156 583 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 HLA-DOAP06340 250 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 ELANEP08246 267 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 IL2RBP14784 551 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 GSPT1P15170 499 aaKnown RBP4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 ATP5JP18859 108 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 POU3F3P20264 500 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 TGM1P22735 817 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 SLC6A9P48067 706 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 TAP1Q03518 808 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 GJC2Q5T442 439 aaPredicted RBP4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 TSHZ3Q63HK5 1081 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 DRC7Q8IY82 874 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 SUPT20HQ8NEM7 779 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 ZSWIM1Q9BR11 485 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 KLHL11Q9NVR0 708 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 SIK3Q9Y2K2 1263 aa4.6□□□□□ -1.67
HMGB1P33-201ENST00000563485 PIPSLA2A3N6 862 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 CCDC78A2IDD5 438 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 CLSTN1O94985 981 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 SLC6A2P23975 617 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 POLR2AP24928 1970 aaKnown RBP4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 PCSK1P29120 753 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 AVPR1BP47901 424 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 SLC5A3P53794 718 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 MGAT2Q10469 447 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 OLFML1Q6UWY5 402 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 MAPKAPK5Q8IW41 473 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 OR2I1PQ8NGU4 316 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 ATL2Q8NHH9 583 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 LINC00476Q8WZB0 136 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 FUBP3Q96I24 572 aaKnown RBP eCLIP4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 SLC2A13Q96QE2 648 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 MYOCQ99972 504 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 SYNPO2LQ9H987 977 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 FBXO34Q9NWN3 711 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 MOCS1Q9NZB8 636 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 SLC23A1Q9UHI7 598 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 ZNHIT2Q9UHR6 403 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 DNM3Q9UQ16 869 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 ACTL7AQ9Y615 435 aa4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 EPN1Q9Y6I3 576 aaPredicted RBP4.59□□□□□ -1.67
HMGB1P33-201ENST00000563485 WASHC2AQ641Q2 1341 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 CDKL5O76039 1030 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 ENDOD1O94919 500 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 PRSS23O95084 383 aa4.58□□□□□ -1.68
HMGB1P33-201ENST00000563485 POMCP01189 267 aa4.58□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms