RNA–Protein interactions for RNA: ENST00000563400.1

VPS35P1-201, Transcript of VPS35, retromer complex component pseudogene 1, humanhuman

BASIC

Gene VPS35P1, Length 1,518 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS35P1-201ENST00000563400 KCNK3O14649 394 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 FSCN2O14926 492 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ARHGAP6O43182 974 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 EIF4EBP3O60516 100 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 MAFO75444 373 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 THBDP07204 575 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ADRB2P07550 413 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 CLTBP09497 229 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 H2AFB1P0C5Y9 115 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 H2AFB2P0C5Z0 115 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ATP6V1B1P15313 513 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ATF7P17544 494 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 EPHA1P21709 976 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ENPP1P22413 925 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 AMPHP49418 695 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 CTCFP49711 727 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 CASP6P55212 293 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 MST1RQ04912 1400 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ERV3-1Q14264 604 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 BECN1Q14457 450 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 DLGAP5Q15398 846 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 LIN54Q6MZP7 749 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 FRMD7Q6ZUT3 714 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 CATSPER4Q7RTX7 472 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 RTN4RL1Q86UN2 441 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 CCDC103Q8IW40 242 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 TMEM130Q8N3G9 435 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 TEX9Q8N6V9 391 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ZMIZ2Q8NF64 920 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 LILRB1Q8NHL6 650 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 MUL1Q969V5 352 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 TP53INP1Q96A56 240 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 EAF2Q96CJ1 260 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 TESK2Q96S53 571 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ZFYVE21Q9BQ24 234 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 CORO1BQ9BR76 489 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 PYM1Q9BRP8 204 aaKnown RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ALG1Q9BT22 464 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 MCMBPQ9BTE3 642 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ZMAT4Q9H898 229 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 GRPEL1Q9HAV7 217 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 KRT82Q9NSB4 513 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 ARGLU1Q9NWB6 273 aaPredicted RBP5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 VPS28Q9UK41 221 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 FBXL21Q9UKT6 434 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 STXBP5LQ9Y2K9 1186 aa5.83□□□□□ -1.48
VPS35P1-201ENST00000563400 POLR3AO14802 1390 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 KIF24Q5T7B8 1368 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ADGRB2O60241 1585 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 EDC4Q6P2E9 1401 aaKnown RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 PI4KAP2A4QPH2 592 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 GOLGA6L3A6NEY3 463 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 CCDC154A6NI56 674 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 AQP12BA6NM10 295 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 HTATSF1O43719 755 aaKnown RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 DTNBO60941 627 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 RTN3O95197 1032 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 IL18RAPO95256 599 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 TGDSO95455 350 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ZNF865P0CJ78 1059 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ZSCAN22P10073 491 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 FOSL1P15407 271 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 KCNA2P16389 499 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 EEF1GP26641 437 aaKnown RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 MAOBP27338 520 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 MAPK4P31152 587 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 CD68P34810 354 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 HSPA1LP34931 641 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 HOXD13P35453 343 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 POLD2P49005 469 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 PSMC1P62191 440 aaKnown RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ST5P78524 1137 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 AMPD2Q01433 879 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 FOXO1Q12778 655 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 MAP3K12Q12852 859 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 MAPK7Q13164 816 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 DAG1Q14118 895 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 FSCN1Q16658 493 aaKnown RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ARHGAP44Q17R89 818 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 C3orf36Q3SXR2 165 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 FAM47CQ5HY64 1035 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ANKRD45Q5TZF3 282 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 RPUSD3Q6P087 351 aaKnown RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 RSPO2Q6UXX9 243 aaPredicted RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 MRPL41Q8IXM3 137 aaKnown RBP5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 TCP11L2Q8N4U5 519 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 SSH1Q8WYL5 1049 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 RFFLQ8WZ73 363 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ZNF566Q969W8 418 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ZUFSPQ96AP4 578 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 HIC2Q96JB3 615 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 KCNC2Q96PR1 638 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 HEPHQ9BQS7 1158 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 STK33Q9BYT3 514 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 NRSN2Q9GZP1 204 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 PNPLA8Q9NP80 782 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 GPR27Q9NS67 375 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 KCND1Q9NSA2 647 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 PDRG1Q9NUG6 133 aa5.82□□□□□ -1.48
VPS35P1-201ENST00000563400 ZHX1Q9UKY1 873 aaPredicted RBP5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms