RNA–Protein interactions for RNA: ENST00000563366.5

UBFD1-202, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 3

Gene UBFD1, Length 709 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-202ENST00000563366 AGO2Q9UKV8 859 aaKnown RBP10.52□□□□□ -0.73
UBFD1-202ENST00000563366 AKT3Q9Y243 479 aa10.52□□□□□ -0.73
UBFD1-202ENST00000563366 A0A0B4J269 797 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 SMIM35A0A1B0GVV1 85 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 SSU72P8A0A1W2PR75 194 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 LRRC53A6NM62 1247 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 ACKR2O00590 384 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 SEPT4O43236 478 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 MSCO60682 206 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 OFD1O75665 1012 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 SRGAP2CP0DJJ0 459 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 RARBP10826 455 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 UCHL3P15374 230 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PON1P27169 355 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 ADSSP30520 456 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 KLK7P49862 253 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 AP3M2P53677 418 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PTENP60484 403 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 POLR2FP61218 127 aaKnown RBP10.51□□□□□ -0.73
UBFD1-202ENST00000563366 POU5F1Q01860 360 aaKnown RBP10.51□□□□□ -0.73
UBFD1-202ENST00000563366 CYP24A1Q07973 514 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 GOLGA8FQ08AF8 430 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 GOLGA8DPQ0D2H9 430 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PRPF4BQ13523 1007 aaKnown RBP10.51□□□□□ -0.73
UBFD1-202ENST00000563366 FSCN1Q16658 493 aaKnown RBP10.51□□□□□ -0.73
UBFD1-202ENST00000563366 FAM187BQ17R55 369 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 KIAA0753Q2KHM9 967 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 KLHDC7AQ5VTJ3 777 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 SFMBT2Q5VUG0 894 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 KRT39Q6A163 491 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 SLC39A4Q6P5W5 647 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PDXDC1Q6P996 788 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 TRIM65Q6PJ69 517 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 RRAGAQ7L523 313 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PHTF2Q8N3S3 785 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 LINC01465Q8N7H1 131 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PLPP7Q8NBV4 271 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 EHBP1Q8NDI1 1231 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PARD3BQ8TEW8 1205 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 TRAPPC12Q8WVT3 735 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PPP1R13BQ96KQ4 1090 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 CCDC42Q96M95 316 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 FNBP1Q96RU3 617 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 ZIC5Q96T25 663 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 MSTO1Q9BUK6 570 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 INO80BQ9C086 356 aaPredicted RBP10.51□□□□□ -0.73
UBFD1-202ENST00000563366 GANQ9H2C0 597 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 IKZF4Q9H2S9 585 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 DEF6Q9H4E7 631 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 TMEM8AQ9HCN3 771 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 ANKFY1Q9P2R3 1169 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 APEX2Q9UBZ4 518 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 PPP2R2CQ9Y2T4 447 aa10.51□□□□□ -0.73
UBFD1-202ENST00000563366 SOWAHDA6NJG2 315 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 EIF3CLB5ME19 914 aaKnown RBP10.5□□□□□ -0.73
UBFD1-202ENST00000563366 TISP43B9A030 160 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 INO80B-WBP1J3KQ70 363 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 HAS3O00219 553 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 OGTO15294 1046 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 ADCY6O43306 1168 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 AOC2O75106 756 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 ZC3H11AO75152 810 aaKnown RBP eCLIP10.5□□□□□ -0.73
UBFD1-202ENST00000563366 NDUFA10O95299 355 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 SERPING1P05155 500 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 TRIM49P0CI25 452 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 TRIM49CP0CI26 452 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 SMIM10L2AP0DMW4 78 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 SMIM10L2BP0DMW5 78 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 YY1P25490 414 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 CLCN3P51790 818 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 PRMT2P55345 433 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 GJA9P57773 515 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 NKX3-2P78367 333 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 NCBP1Q09161 790 aaKnown RBP10.5□□□□□ -0.73
UBFD1-202ENST00000563366 DRP2Q13474 957 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 RAPGEF1Q13905 1077 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 PSMD6Q15008 389 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 SPA17Q15506 151 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 MAP7D1Q3KQU3 841 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 PRAMEF19Q5SWL8 479 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 NFRKBQ6P4R8 1299 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 WDR59Q6PJI9 974 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 MPZL3Q6UWV2 235 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 TSHZ1Q6ZSZ6 1077 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 SRGAP1Q7Z6B7 1085 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 VPS36Q86VN1 386 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 CBWD2Q8IUF1 395 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 CCDC155Q8N6L0 562 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 TRIB2Q92519 343 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 SAAL1Q96ER3 474 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 ERO1AQ96HE7 468 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 C16orf45Q96MC5 204 aaPredicted RBP10.5□□□□□ -0.73
UBFD1-202ENST00000563366 SCLT1Q96NL6 688 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 EIF3CQ99613 913 aaKnown RBP10.5□□□□□ -0.73
UBFD1-202ENST00000563366 ACO2Q99798 780 aaKnown RBP10.5□□□□□ -0.73
UBFD1-202ENST00000563366 FAM213AQ9BRX8 229 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 CRACR2AQ9BSW2 395 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 TCHPQ9BT92 498 aa10.5□□□□□ -0.73
UBFD1-202ENST00000563366 TARS2Q9BW92 718 aaKnown RBP10.5□□□□□ -0.73
UBFD1-202ENST00000563366 UPF3AQ9H1J1 476 aaKnown RBP10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms