RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 ARNTLO00327 626 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 AXIN1O15169 862 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 MSH4O15457 936 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 XYLBO75191 536 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 EPN2O95208 641 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 ITGA4P13612 1032 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 CEBPBP17676 345 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 SFNP31947 248 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 RAP1GAPP47736 663 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 PABPC1LQ4VXU2 614 aaKnown RBP8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 PRR16Q569H4 304 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 XKR3Q5GH77 459 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 LIN9Q5TKA1 542 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 CASC1Q6TDU7 716 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 NFXL1Q6ZNB6 911 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 ANO5Q75V66 913 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 CHD1LQ86WJ1 897 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 SPEM1Q8N4L4 309 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 ZNF713Q8N859 430 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 CNNM3Q8NE01 707 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 EXOC6Q8TAG9 804 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 SLC7A14Q8TBB6 771 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 FAM3CQ92520 227 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 RABGGTAQ92696 567 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 SLC5A5Q92911 643 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 PAAF1Q9BRP4 392 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 OCEL1Q9H607 264 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 ZNF334Q9HCZ1 680 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 GDE1Q9NZC3 331 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 CACNG4Q9UBN1 327 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 POLIQ9UNA4 740 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 HES2Q9Y543 173 aa8.65□□□□□ -1.02
HERPUD1-206ENST00000563343 PTPRDP23468 1912 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 DENND4CQ5VZ89 1909 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 ASCC3Q8N3C0 2202 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 ESYT2A0FGR8 921 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 PSMD10O75832 226 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 RHOP08100 348 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 GSPT1P15170 499 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 HOXA6P31267 233 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 DNM2P50570 870 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 JAK3P52333 1124 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 RAB33AQ14088 237 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 GRM2Q14416 872 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 PSMD5Q16401 504 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 UVSSAQ2YD98 709 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 PRSS36Q5K4E3 855 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 AXDND1Q5T1B0 1012 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 B4GALNT3Q6L9W6 998 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 VITQ6UXI7 678 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 Q6ZS52 159 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 SRGAP1Q7Z6B7 1085 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 WDR5BQ86VZ2 330 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 MICU3Q86XE3 530 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 C12orf50Q8NA57 414 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 RDM1Q8NG50 284 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 GJA10Q969M2 543 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 LOXL4Q96JB6 756 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 RIT2Q99578 217 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 GLT8D2Q9H1C3 349 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 BRD9Q9H8M2 597 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 TCEAL9Q9UHQ7 104 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 GIT1Q9Y2X7 761 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 MRPS23Q9Y3D9 190 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 COL4A3BPQ9Y5P4 624 aa8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 V9GY48 417 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-206ENST00000563343 PCNX2A6NKB5 2137 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 ZMYM2Q9UBW7 1377 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 SF3B1O75533 1304 aaKnown RBP eCLIP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 THADAQ6YHU6 1953 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 CHMP2AO43633 222 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 NR1I2O75469 434 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 MCM5P33992 734 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 MLLT6P55198 1093 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 NUCB1Q02818 461 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 ZNF252P-AS1Q0IIN9 211 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 FOXC1Q12948 553 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 GRIK3Q13003 919 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 AMHR2Q16671 573 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 SOWAHCQ53LP3 525 aaPredicted RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 FAM78AQ5JUQ0 283 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 PLA2G4FQ68DD2 849 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 HEATR6Q6AI08 1181 aaKnown RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 APOA5Q6Q788 366 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 RTL10Q7L3V2 364 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 ASB16Q96NS5 453 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 TTPALQ9BTX7 342 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 TRMT61BQ9BVS5 477 aaKnown RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 TEKT3Q9BXF9 490 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 LRRC2Q9BYS8 371 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 ZMYND12Q9H0C1 365 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 NXF3Q9H4D5 531 aaKnown RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 SMOC1Q9H4F8 434 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 DHX33Q9H6R0 707 aaKnown RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 RBM12Q9NTZ6 932 aaKnown RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 RBM8AQ9Y5S9 174 aaKnown RBP8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 SLC12A7Q9Y666 1083 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 PIAS3Q9Y6X2 628 aa8.63□□□□□ -1.03
HERPUD1-206ENST00000563343 BPTFQ12830 3046 aa8.62□□□□□ -1.03
HERPUD1-206ENST00000563343 SGSM2O43147 1006 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms