RNA–Protein interactions for RNA: ENST00000563273.5

NSMCE1-204, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-204ENST00000563273 TEX28O15482 410 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 PIGRP01833 764 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 TXLNAP40222 546 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 MCL1Q07820 350 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 KYAT1Q16773 422 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 PDXDC1Q6P996 788 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 RASSF8Q8NHQ8 419 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 DDX27Q96GQ7 796 aaKnown RBP13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 SNX27Q96L92 541 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 ACAP3Q96P50 834 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 ST6GALNAC4Q9H4F1 302 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 C11orf16Q9NQ32 467 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 CNTN3Q9P232 1028 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 CCDC39Q9UFE4 941 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 GDAQ9Y2T3 454 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 NR2E1Q9Y466 385 aa13.39□□□□□ -0.27
NSMCE1-204ENST00000563273 C5orf42Q9H799 3197 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 SMIM28A0A1B0GU29 152 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 CASTOR2A6NHX0 329 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 PRR33A8MZF0 331 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 FAM13AO94988 1023 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 KIF4AO95239 1232 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 GLUD1P00367 558 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 MARCKSP29966 332 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 RAD51AP2Q09MP3 1159 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 NOLC1Q14978 699 aaKnown RBP eCLIP13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 ATAT1Q5SQI0 421 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 DCLRE1AQ6PJP8 1040 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 HAUS6Q7Z4H7 955 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 GPR149Q86SP6 731 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 HSCBQ8IWL3 235 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 PIK3R5Q8WYR1 880 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 EPSTI1Q96J88 318 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 USP28Q96RU2 1077 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 PAAF1Q9BRP4 392 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 TCHPQ9BT92 498 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 LRFN3Q9BTN0 628 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 PLEKHA4Q9H4M7 779 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 PLEKHA5Q9HAU0 1116 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 USTQ9Y2C2 406 aa13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 ARIH1Q9Y4X5 557 aaPredicted RBP13.38□□□□□ -0.27
NSMCE1-204ENST00000563273 NPHP3-ACAD11A0A0J9YXS1 232 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 C2CD2LO14523 706 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 CLDN3O15551 220 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 TRAK2O60296 914 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 MCM6Q14566 821 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 UPP1Q16831 310 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 RARS2Q5T160 578 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 FAM173BQ6P4H8 233 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 LILRA6Q6PI73 481 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 CEP120Q8N960 986 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 KRI1Q8N9T8 703 aaKnown RBP13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 RIN2Q8WYP3 895 aaPredicted RBP13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 FIZ1Q96SL8 496 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 TTPALQ9BTX7 342 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 CXCL16Q9H2A7 254 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 POMKQ9H5K3 350 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 ZDHHC7Q9NXF8 308 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 TBX20Q9UMR3 447 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 GTF3C3Q9Y5Q9 886 aa13.37□□□□□ -0.27
NSMCE1-204ENST00000563273 TRAPPC3O43617 180 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 PPP6R2O75170 966 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 TBCAO75347 108 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 KRT18P05783 430 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 CLTAP09496 248 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 FGFR3P22607 806 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 RPL9P32969 192 aaKnown RBP13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 GTF2BQ00403 316 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 RTP2Q5QGT7 225 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 CCDC73Q6ZRK6 1079 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 USP49Q70CQ1 688 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 RTL10Q7L3V2 364 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 ZBTB33Q86T24 672 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 MAP4K3Q8IVH8 894 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 ZDHHC14Q8IZN3 488 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 MYCT1Q8N699 235 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 LINC00301Q8NCQ3 95 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 EDAQ92838 391 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 HVCN1Q96D96 273 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 ZBTB45Q96K62 511 aaPredicted RBP13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 RPGRIP1Q96KN7 1286 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 ZNF396Q96N95 335 aaPredicted RBP13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 APOL5Q9BWW9 433 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 MAN1C1Q9NR34 630 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 SEL1LQ9UBV2 794 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 MUTYHQ9UIF7 546 aa13.36□□□□□ -0.27
NSMCE1-204ENST00000563273 K7ENM7 598 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 B3GAT3O94766 335 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 YEATS4O95619 227 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 ADRB2P07550 413 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 COL9A1P20849 921 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 LIG4P49917 911 aa13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 POU5F1Q01860 360 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 DHX8Q14562 1220 aaKnown RBP13.35□□□□□ -0.27
NSMCE1-204ENST00000563273 SLC10A6Q3KNW5 377 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms