RNA–Protein interactions for RNA: ENST00000563063.1

AC011840.2-201, humanhuman

BASIC

Gene AC011840.2, Length 1,520 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC011840.2-201ENST00000563063 CNOT6LQ96LI5 555 aaKnown RBP16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 FBXL18Q96ME1 805 aa16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 RNF39Q9H2S5 420 aa16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 IL23AQ9NPF7 189 aa16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 RGS18Q9NS28 235 aa16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 CPSF3Q9UKF6 684 aaKnown RBP16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 FRMD4BQ9Y2L6 1034 aa16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 ANK1P16157 1881 aa16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 CITO14578 2027 aa16.3■□□□□ 0.2
AC011840.2-201ENST00000563063 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 C9IYK1 514 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 KIAA0391O15091 583 aaKnown RBP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 SLC16A3O15427 465 aaKnown RBP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 RECQL4O94761 1208 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 TPM1P09493 284 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 EPB41P11171 864 aaKnown RBP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 GRM5P41594 1212 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 PPIGQ13427 754 aaKnown RBP eCLIP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 ENOX2Q16206 610 aaKnown RBP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 C16orf59Q7L2K0 433 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 APBB1IPQ7Z5R6 666 aaPredicted RBP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 CREBRFQ8IUR6 639 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 FAM84AQ96KN4 292 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 CXCL16Q9H2A7 254 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 RBAKQ9NYW8 714 aaPredicted RBP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 RALGAPA2Q2PPJ7 1873 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 TRIP11Q15643 1979 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 A0A0U1RQF3 1178 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 A0A1W2PQC6 194 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 ENPP3O14638 875 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 CYP24A1Q07973 514 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 CCDC40Q4G0X9 1142 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 PPFIBP1Q86W92 1011 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 ECHDC2Q86YB7 292 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 BRSK2Q8IWQ3 736 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 PLEKHO2Q8TD55 490 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 TRAIPQ9BWF2 469 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 RNF19AQ9NV58 838 aa16.29■□□□□ 0.2
AC011840.2-201ENST00000563063 TTC3P53804 2025 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 PDE4DIPQ5VU43 2346 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 ZNF233A6NK53 670 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 CCP110O43303 1012 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 PFKMP08237 780 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 CLTAP09496 248 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 PSMC2P35998 433 aaKnown RBP16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 RAB27AP51159 221 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 IKBKEQ14164 716 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 ARID5BQ14865 1188 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 SLC24A5Q71RS6 500 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 OTOP2Q7RTS6 562 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 RPUSD2Q8IZ73 545 aaKnown RBP16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 IQCDQ96DY2 449 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 FAM212AQ96EL1 285 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 LBHD1Q9BQE6 289 aaPredicted RBP16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 CCDC94Q9BW85 323 aaPredicted RBP16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 C1orf112Q9NSG2 853 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 KLK14Q9P0G3 267 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 PARP2Q9UGN5 583 aa16.28■□□□□ 0.2
AC011840.2-201ENST00000563063 LGALS16A8MUM7 142 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 AKR1B15C9JRZ8 316 aaPredicted RBP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 LDHAP00338 332 aaKnown RBP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 TRIM49P0CI25 452 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 TRIM49CP0CI26 452 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 ITGA4P13612 1032 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 DCAF17Q5H9S7 520 aaPredicted RBP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 ZNF365Q70YC5 407 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 ZNF598Q86UK7 904 aaKnown RBP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 CCDC127Q96BQ5 260 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 BORCS6Q96GS4 357 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 SNX27Q96L92 541 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 ZFP42Q96MM3 310 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 ACAP3Q96P50 834 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 MKNK1Q9BUB5 465 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 NAA15Q9BXJ9 866 aaKnown RBP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 RPF1Q9H9Y2 349 aaKnown RBP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 KIAA1586Q9HCI6 787 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 PDE11AQ9HCR9 933 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 TOPORSQ9NS56 1045 aaPredicted RBP16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 NR2E3Q9Y5X4 410 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 PTPRSQ13332 1948 aa16.27■□□□□ 0.2
AC011840.2-201ENST00000563063 LAMA3Q16787 3333 aa16.27■□□□□ 0.19
AC011840.2-201ENST00000563063 TEX33O43247 280 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 STX10O60499 249 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 ZNF623O75123 536 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 GNA14O95837 355 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 MAGEA10P43363 369 aaPredicted RBP16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 MTIF2P46199 727 aaKnown RBP16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 DLG4P78352 724 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 DEFB103AP81534 67 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 SLC10A6Q3KNW5 377 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 TMEM240Q5SV17 173 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 LMBRD2Q68DH5 695 aaPredicted RBP16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 AGMOQ6ZNB7 445 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 MRPL10Q7Z7H8 261 aaKnown RBP16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 CNGA4Q8IV77 575 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 TMEM130Q8N3G9 435 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 MFSD14AQ96MC6 490 aa16.26■□□□□ 0.19
AC011840.2-201ENST00000563063 PANX2Q96RD6 677 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms