RNA–Protein interactions for RNA: ENST00000562747.1

CDT1-202, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 2

Gene CDT1, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-202ENST00000562747 TMEM175Q9BSA9 504 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 TARS2Q9BW92 718 aaKnown RBP18.15■□□□□ 0.5
CDT1-202ENST00000562747 SCAND2PQ9GZW5 306 aaPredicted RBP18.15■□□□□ 0.5
CDT1-202ENST00000562747 SMOC2Q9H3U7 446 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 ZHX3Q9H4I2 956 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 POMKQ9H5K3 350 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 NGRNQ9NPE2 291 aaKnown RBP18.15■□□□□ 0.5
CDT1-202ENST00000562747 SEL1LQ9UBV2 794 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 PUF60Q9UHX1 559 aaKnown RBP18.15■□□□□ 0.5
CDT1-202ENST00000562747 HCFC2Q9Y5Z7 792 aa18.15■□□□□ 0.5
CDT1-202ENST00000562747 DENND4AQ7Z401 1863 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 C2orf71A6NGG8 1288 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 TOM1L1O75674 476 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 POMCP01189 267 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 GALTP07902 379 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 GAP43P17677 238 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 PROZP22891 400 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 AVPR2P30518 371 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 SCNN1GP51170 649 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 ZNF568Q3ZCX4 644 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 ADALQ6DHV7 355 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 MPZL3Q6UWV2 235 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 ZPBP2Q6X784 338 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 TMC7Q7Z402 723 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 ZNF280BQ86YH2 543 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 FEZF2Q8TBJ5 459 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 DHX58Q96C10 678 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 ZFP42Q96MM3 310 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 RPS6KC1Q96S38 1066 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 PRRX2Q99811 253 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 GBP3Q9H0R5 595 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 CDT1Q9H211 546 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 ST6GALNAC4Q9H4F1 302 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 MAGEF1Q9HAY2 307 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 KBTBD4Q9NVX7 518 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 SNTG2Q9NY99 539 aa18.14■□□□□ 0.49
CDT1-202ENST00000562747 C2CD4DB7Z1M9 353 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 NT5C1B-RDH14C9J2C7 533 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 ABLIM1O14639 778 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 POLR2DO15514 142 aaKnown RBP18.13■□□□□ 0.49
CDT1-202ENST00000562747 CLASP2O75122 1294 aaKnown RBP18.13■□□□□ 0.49
CDT1-202ENST00000562747 RECQL4O94761 1208 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 DDHD2O94830 711 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 WEE2P0C1S8 567 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 MCF2P10911 925 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 GTF2BQ00403 316 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 AMPD3Q01432 767 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 GRIK3Q13003 919 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 ZBTB33Q86T24 672 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 TMEM173Q86WV6 379 aaPredicted RBP18.13■□□□□ 0.49
CDT1-202ENST00000562747 KREMEN2Q8NCW0 462 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 GSTCDQ8NEC7 633 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 TCHPQ9BT92 498 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 TSHZ2Q9NRE2 1034 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 MIOSQ9NXC5 875 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 DNAJB4Q9UDY4 337 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 TBX20Q9UMR3 447 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 CACNA1HO95180 2353 aa18.13■□□□□ 0.49
CDT1-202ENST00000562747 TDRD15B5MCY1 1934 aaKnown RBP18.13■□□□□ 0.49
CDT1-202ENST00000562747 FRMD3A2A2Y4 597 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 PIGRP01833 764 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 ALDH2P05091 517 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 HOXB8P17481 243 aaPredicted RBP18.12■□□□□ 0.49
CDT1-202ENST00000562747 CMA1P23946 247 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 GRM5P41594 1212 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 SLC11A1P49279 550 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 DSC1Q08554 894 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 SMC1AQ14683 1233 aaKnown RBP18.12■□□□□ 0.49
CDT1-202ENST00000562747 KANK3Q6NY19 840 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 SFR1Q86XK3 245 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 COLGALT2Q8IYK4 626 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 MRPL43Q8N983 215 aaKnown RBP18.12■□□□□ 0.49
CDT1-202ENST00000562747 AUTS2Q8WXX7 1259 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 CASP10Q92851 521 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 TMEM169Q96HH4 297 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 CHAMP1Q96JM3 812 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 CCDC94Q9BW85 323 aaPredicted RBP18.12■□□□□ 0.49
CDT1-202ENST00000562747 OLFML3Q9NRN5 406 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 KLK14Q9P0G3 267 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 KCNH3Q9ULD8 1083 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 FAN1Q9Y2M0 1017 aa18.12■□□□□ 0.49
CDT1-202ENST00000562747 TCHHQ07283 1943 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 DMDP11532 3685 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 B4GALT3O60512 393 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 IDEP14735 1019 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 NMT1P30419 496 aaKnown RBP18.11■□□□□ 0.49
CDT1-202ENST00000562747 MCL1Q07820 350 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 NOLC1Q14978 699 aaKnown RBP eCLIP18.11■□□□□ 0.49
CDT1-202ENST00000562747 CNNM4Q6P4Q7 775 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 ZNF720Q7Z2F6 126 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 MAP4K3Q8IVH8 894 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 C12orf76Q8N812 135 aaPredicted RBP18.11■□□□□ 0.49
CDT1-202ENST00000562747 BCL7CQ8WUZ0 217 aaPredicted RBP18.11■□□□□ 0.49
CDT1-202ENST00000562747 HVCN1Q96D96 273 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 BICD1Q96G01 975 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 IGSF21Q96ID5 467 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 RIPOR3Q96MK2 946 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 ADAM7Q9H2U9 754 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 PANK4Q9NVE7 773 aa18.11■□□□□ 0.49
CDT1-202ENST00000562747 STK39Q9UEW8 545 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms