RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 NLRP11P59045 1033 aaKnown RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 SV2CQ496J9 727 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 CELF3Q5SZQ8 465 aaKnown RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 TRAPPC11Q7Z392 1133 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 PRRT2Q7Z6L0 340 aaPredicted RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 TRIM59Q8IWR1 403 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 PRPF31Q8WWY3 499 aaKnown RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 MAGOHBQ96A72 148 aaKnown RBP8.05□□□□□ -1.12
TCF4-216ENST00000562680 IP6K2Q9UHH9 426 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 PLAGL2Q9UPG8 496 aa8.05□□□□□ -1.12
TCF4-216ENST00000562680 GRID2IPA4D2P6 1211 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 MOCS3O95396 460 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 KLRC1P26715 233 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 ICAM3P32942 547 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 SLC1A1P43005 524 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 CNTN2Q02246 1040 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 LRRC71Q8N4P6 559 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 APBA2Q99767 749 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 HSD17B14Q9BPX1 270 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 SNCAIPQ9Y6H5 919 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 HOXA2O43364 376 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 KRT1P04264 644 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 KRT7P08729 469 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 MCF2P10911 925 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 ITGA4P13612 1032 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 CD44P16070 742 aaKnown RBP8.04□□□□□ -1.12
TCF4-216ENST00000562680 ELF1P32519 619 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 CLK2P49760 499 aaKnown RBP8.04□□□□□ -1.12
TCF4-216ENST00000562680 PSMD7P51665 324 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 BFSP2Q13515 415 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 GLB1LQ6UWU2 654 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 TSHZ1Q6ZSZ6 1077 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 C1orf186Q6ZWK4 172 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 C4orf32Q8N8J7 132 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 TC2NQ8N9U0 490 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 MBOAT7Q96N66 472 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 CGRRF1Q99675 332 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 RSPH10B2B2RC85 870 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 EML1O00423 815 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 ADCY3O60266 1144 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 RSPH10BP0C881 870 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 CYP2C8P10632 490 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 ATF2P15336 505 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 PHBP35232 272 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 ACOT2P49753 483 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 MDM2Q00987 491 aaPredicted RBP8.04□□□□□ -1.12
TCF4-216ENST00000562680 NCAPHQ15003 741 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 MAP4K3Q8IVH8 894 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 PPP1R14CQ8TAE6 165 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 RNF139Q8WU17 664 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 PDGFDQ9GZP0 370 aaPredicted RBP8.04□□□□□ -1.12
TCF4-216ENST00000562680 WNT8AQ9H1J5 351 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 SEMA6BQ9H3T3 888 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 MCF2LO15068 1137 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 NOP14P78316 857 aaKnown RBP8.04□□□□□ -1.12
TCF4-216ENST00000562680 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.04□□□□□ -1.12
TCF4-216ENST00000562680 FAM76AQ8TAV0 307 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 NKIRAS1Q9NYS0 192 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 AGAP1Q9UPQ3 857 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 ZNF148Q9UQR1 794 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 RAB27AP51159 221 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 SPRYD7Q5W111 196 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 KIAA0895Q8NCT3 520 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 SH2D3AQ9BRG2 576 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 ANAPC7Q9UJX3 599 aa8.04□□□□□ -1.12
TCF4-216ENST00000562680 C4AP0C0L4 1744 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 COL1A2P08123 1366 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ITGB5P18084 799 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PCSK1P29120 753 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ATICP31939 592 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 CCZ1BP86790 482 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 CCZ1P86791 482 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 SLMAPQ14BN4 828 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 WDR49Q8IV35 697 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 SLC9A9Q8IVB4 645 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ZCCHC17Q9NP64 241 aaKnown RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 DDX56Q9NY93 547 aaKnown RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 EHD2Q9NZN4 543 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 DDX41Q9UJV9 622 aaKnown RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 TACC3Q9Y6A5 838 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 CCDC88AQ3V6T2 1871 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 CARNS1A5YM72 827 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 LRRC10BA6NIK2 292 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 A8MXQ7 604 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ACKR2O00590 384 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 CREB3O43889 395 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PPP1R11O60927 126 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 ECEL1O95672 775 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 FTLP02792 175 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 GYPCP04921 128 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 INSRRP14616 1297 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 PSMA2P25787 234 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 FXR1P51114 621 aaKnown RBP eCLIP8.03□□□□□ -1.12
TCF4-216ENST00000562680 NAB2Q15742 525 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 BMT2Q1RMZ1 405 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 WDR72Q3MJ13 1102 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 DENND2CQ68D51 928 aa8.03□□□□□ -1.12
TCF4-216ENST00000562680 ZNF564Q8TBZ8 553 aaPredicted RBP8.03□□□□□ -1.12
TCF4-216ENST00000562680 L3MBTL3Q96JM7 780 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms