RNA–Protein interactions for RNA: ENST00000562553.5

CCNDBP1-203, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-203ENST00000562553 CA8P35219 290 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 MATR3P43243 847 aaKnown RBP eCLIP16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 CASP5P51878 434 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 TUSC3Q13454 348 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 SMC1AQ14683 1233 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 ALKAL1Q6UXT8 129 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 SNX27Q96L92 541 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 PPP1R10Q96QC0 940 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 STRA6Q9BX79 667 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 TRIM9Q9C026 710 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 MRPL44Q9H9J2 332 aaKnown RBP16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 GDPD2Q9HCC8 539 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 PANK4Q9NVE7 773 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 SEL1LQ9UBV2 794 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 ATP6V1DQ9Y5K8 247 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 VWA8A3KMH1 1905 aa16.82■□□□□ 0.28
CCNDBP1-203ENST00000562553 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 ANKRD63C9JTQ0 380 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 NCK2O43639 380 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 CXCL14O95715 111 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 EFEMP2O95967 443 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 MYBP10242 640 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 SCP2P22307 547 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 CASP1P29466 404 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 YARSP54577 528 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 KCNA1Q09470 495 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 COASYQ13057 564 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 CLUL1Q15846 466 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 XKR4Q5GH76 650 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 HERC4Q5GLZ8 1057 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 ZBTB41Q5SVQ8 909 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 TAS1R1Q7RTX1 841 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 RNF168Q8IYW5 571 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 MRPL43Q8N983 215 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 HASPINQ8TF76 798 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 ZMAT2Q96NC0 199 aaKnown RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 ACAP3Q96P50 834 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 HERC2P3Q9BVR0 1158 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 COLEC11Q9BWP8 271 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 GOLGA2P5Q9HBQ8 144 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 KCNH3Q9ULD8 1083 aa16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 BARX2Q9UMQ3 279 aaPredicted RBP16.81■□□□□ 0.28
CCNDBP1-203ENST00000562553 SMIM28A0A1B0GU29 152 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 A0A1B0GVL5 298 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 FAM189A1O60320 539 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 NR1I2O75469 434 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 KIF4AO95239 1232 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 GCNT3O95395 438 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 SOD2P04179 222 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 CXCL8P10145 99 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 PFKFB1P16118 471 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 IGFBP6P24592 240 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 TNFSF9P41273 254 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 NDUFV1P49821 464 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 ASIC1P78348 528 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 SOX4Q06945 474 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 HSP90AA2PQ14568 343 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 PTPN14Q15678 1187 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 SLC10A6Q3KNW5 377 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 PUS10Q3MIT2 529 aaKnown RBP16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 TPRNQ4KMQ1 711 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 ADALQ6DHV7 355 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 FUT10Q6P4F1 479 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 CCDC65Q8IXS2 484 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 GRAMD1CQ8IYS0 662 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 HPS3Q969F9 1004 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 GPR62Q9BZJ7 368 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 OLFML3Q9NRN5 406 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 TOPORSQ9NS56 1045 aaPredicted RBP16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 CLEC1BQ9P126 229 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 SERTAD1Q9UHV2 236 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 PLXNA3P51805 1871 aa16.8■□□□□ 0.28
CCNDBP1-203ENST00000562553 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 ACTN4O43707 911 aaKnown RBP16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 CLASP2O75122 1294 aaKnown RBP16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 CMA1P23946 247 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 NUCB2P80303 420 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 KCNC3Q14003 757 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 LLGL2Q6P1M3 1020 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 TMEM130Q8N3G9 435 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 GLIS3Q8NEA6 775 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 HVCN1Q96D96 273 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 B3GALT6Q96L58 329 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 CDCA3Q99618 268 aaPredicted RBP16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 C7orf25Q9BPX7 421 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 SCAND2PQ9GZW5 306 aaPredicted RBP16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 BLZF1Q9H2G9 400 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 MAGEF1Q9HAY2 307 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 CNTN3Q9P232 1028 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 ADAM28Q9UKQ2 775 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 HPSEQ9Y251 543 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 IRAK3Q9Y616 596 aa16.79■□□□□ 0.28
CCNDBP1-203ENST00000562553 A0A0B4J269 797 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 C2CD2LO14523 706 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 OGTO15294 1046 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 LILRB3O75022 631 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 CLTAP09496 248 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 IL9P15248 144 aa16.78■□□□□ 0.28
CCNDBP1-203ENST00000562553 KCNE1P15382 129 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms