RNA–Protein interactions for RNA: ENST00000562523.1

NIP7-204, Transcript of NIP7, nucleolar pre-rRNA processing protein, humanhuman

TSL 3

Gene NIP7, Length 760 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIP7-204ENST00000562523 CHAF1AQ13111 956 aaPredicted RBP5.29□□□□□ -1.56
NIP7-204ENST00000562523 KCNAB2Q13303 367 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 IFIT5Q13325 482 aaKnown RBP5.29□□□□□ -1.56
NIP7-204ENST00000562523 LSAMPQ13449 338 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 GCKRQ14397 625 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 NCAPHQ15003 741 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 RALBP1Q15311 655 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 SV2CQ496J9 727 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 HS1BP3Q53T59 392 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 C15orf52Q6ZUT6 534 aaKnown RBP5.29□□□□□ -1.56
NIP7-204ENST00000562523 Q8N1Y9 231 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 C8orf58Q8NAV2 365 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 RCBTB1Q8NDN9 531 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 Q8TCH9 128 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 WWC2-AS2Q96NR7 200 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 UHRF1Q96T88 793 aaPredicted RBP5.29□□□□□ -1.56
NIP7-204ENST00000562523 CNNM1Q9NRU3 951 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 CLDND1Q9NY35 253 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 ING1Q9UK53 422 aaPredicted RBP5.29□□□□□ -1.56
NIP7-204ENST00000562523 MYH1P12882 1939 aa5.29□□□□□ -1.56
NIP7-204ENST00000562523 RPAP1Q9BWH6 1393 aaPredicted RBP5.29□□□□□ -1.56
NIP7-204ENST00000562523 VCANP13611 3396 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 H7BY64 318 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 ARNTLO00327 626 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 CXCL11O14625 94 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 SCAMP3O14828 347 aaKnown RBP5.28□□□□□ -1.56
NIP7-204ENST00000562523 DGKIO75912 1065 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 ZNF853P0CG23 659 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 ZKSCAN1P17029 563 aaPredicted RBP5.28□□□□□ -1.56
NIP7-204ENST00000562523 CYP2B6P20813 491 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 HIBADHP31937 336 aaKnown RBP5.28□□□□□ -1.56
NIP7-204ENST00000562523 GYG1P46976 350 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 SMAD3P84022 425 aaKnown RBP5.28□□□□□ -1.56
NIP7-204ENST00000562523 TCP10Q12799 353 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 PABPC4Q13310 644 aaKnown RBP eCLIP5.28□□□□□ -1.56
NIP7-204ENST00000562523 FAM110CQ1W6H9 321 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 LRRC26Q2I0M4 334 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 G2E3Q7L622 706 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 FAM83AQ86UY5 434 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 TSPYL6Q8N831 410 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 RASGRP4Q8TDF6 673 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 TBC1D22AQ8WUA7 517 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 ATXN2LQ8WWM7 1075 aaKnown RBP5.28□□□□□ -1.56
NIP7-204ENST00000562523 ANAPC16Q96DE5 110 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 SENP6Q9GZR1 1112 aaPredicted RBP5.28□□□□□ -1.56
NIP7-204ENST00000562523 THEGQ9P2T0 379 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 FBXL7Q9UJT9 491 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 OGDHLQ9ULD0 1010 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 TESMINQ9Y4I5 508 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 ZHX2Q9Y6X8 837 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 PLXNA1Q9UIW2 1896 aa5.28□□□□□ -1.56
NIP7-204ENST00000562523 DNAH12Q6ZR08 3092 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 PFASO15067 1338 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 MYBBP1AQ9BQG0 1328 aaKnown RBP5.27□□□□□ -1.57
NIP7-204ENST00000562523 TRIM75PA6NK02 468 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 TADA3O75528 432 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 CSF1RP07333 972 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 CNGA1P29973 690 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 LTBRP36941 435 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 GCLCP48506 637 aaPredicted RBP5.27□□□□□ -1.57
NIP7-204ENST00000562523 MRPS5P82675 430 aaKnown RBP5.27□□□□□ -1.57
NIP7-204ENST00000562523 SHHQ15465 462 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 CCDC57Q2TAC2 916 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 CAVIN4Q5BKX8 364 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 PHF19Q5T6S3 580 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 GIMAP6Q6P9H5 292 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 LDHAL6AQ6ZMR3 332 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 PPIL6Q8IXY8 311 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 FAM169BQ8N8A8 192 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 NUDT10Q8NFP7 164 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 TDRD7Q8NHU6 1098 aaKnown RBP5.27□□□□□ -1.57
NIP7-204ENST00000562523 DNAAF4Q8WXU2 420 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 NUDT11Q96G61 164 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 RNPC3Q96LT9 517 aaKnown RBP5.27□□□□□ -1.57
NIP7-204ENST00000562523 DRC1Q96MC2 740 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 GNRHR2Q96P88 292 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 PRDM16Q9HAZ2 1276 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 MYOTQ9UBF9 498 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 RBPJLQ9UBG7 517 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 WASF3Q9UPY6 502 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 ATP11BQ9Y2G3 1177 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.27□□□□□ -1.57
NIP7-204ENST00000562523 SLC45A1Q9Y2W3 748 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 LRRFIP2Q9Y608 721 aaKnown RBP5.27□□□□□ -1.57
NIP7-204ENST00000562523 MCM3APO60318 1980 aa5.27□□□□□ -1.57
NIP7-204ENST00000562523 FOCADQ5VW36 1801 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 PRRC2BQ5JSZ5 2229 aaKnown RBP5.26□□□□□ -1.57
NIP7-204ENST00000562523 NPIPB8E9PQR5 432 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 APAF1O14727 1248 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 TBX1O43435 398 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 MAFKO60675 156 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 CPP00450 1065 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 ITGAVP06756 1048 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 LCP1P13796 627 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 HDLBPQ00341 1268 aaKnown RBP5.26□□□□□ -1.57
NIP7-204ENST00000562523 UBE4AQ14139 1066 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 SF1Q15637 639 aaKnown RBP5.26□□□□□ -1.57
NIP7-204ENST00000562523 PRSS53Q2L4Q9 553 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 EMC4Q5J8M3 183 aa5.26□□□□□ -1.57
NIP7-204ENST00000562523 FKBP1CQ5VVH2 108 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms