RNA–Protein interactions for RNA: ENST00000562357.5

CMTM3-204, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 792 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-204ENST00000562357 GLRA4Q5JXX5 417 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 KIAA0319Q5VV43 1072 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 FAM173BQ6P4H8 233 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 TAS1R3Q7RTX0 852 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 TAS1R1Q7RTX1 841 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 RNF168Q8IYW5 571 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-204ENST00000562357 KRI1Q8N9T8 703 aaKnown RBP19.52■□□□□ 0.72
CMTM3-204ENST00000562357 HASPINQ8TF76 798 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 RIN2Q8WYP3 895 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-204ENST00000562357 RABGGTAQ92696 567 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 GPR62Q9BZJ7 368 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 PTPRHQ9HD43 1115 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 TSHZ2Q9NRE2 1034 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 CHST7Q9NS84 486 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 STK17AQ9UEE5 414 aa19.52■□□□□ 0.72
CMTM3-204ENST00000562357 FBXO2Q9UK22 296 aaPredicted RBP19.52■□□□□ 0.72
CMTM3-204ENST00000562357 K7ENM7 598 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 TEX28O15482 410 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 KIF4AO95239 1232 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 BRD1O95696 1058 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 STK38Q15208 465 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 ARSHQ5FYA8 562 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 SPECC1Q5M775 1068 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 PDXDC1Q6P996 788 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 HAUS6Q7Z4H7 955 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 CEP120Q8N960 986 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 EPSTI1Q96J88 318 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 ZNF396Q96N95 335 aaPredicted RBP19.51■□□□□ 0.71
CMTM3-204ENST00000562357 PAAF1Q9BRP4 392 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 RXFP1Q9HBX9 757 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 BLOC1S4Q9NUP1 217 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 CACNG4Q9UBN1 327 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 MUTYHQ9UIF7 546 aa19.51■□□□□ 0.71
CMTM3-204ENST00000562357 HNRNPDLO14979 420 aaKnown RBP19.5■□□□□ 0.71
CMTM3-204ENST00000562357 TRAPPC3O43617 180 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 GPR37L1O60883 481 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 B3GAT3O94766 335 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 EFEMP2O95967 443 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 PROZP22891 400 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 DDIT3P35638 169 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 LIG4P49917 911 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 NCKAP1LP55160 1127 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 HERC4Q5GLZ8 1057 aaPredicted RBP19.5■□□□□ 0.71
CMTM3-204ENST00000562357 FAM171A1Q5VUB5 890 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 RRAGBQ5VZM2 374 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 TMC5Q6UXY8 1006 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 CCDC73Q6ZRK6 1079 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 CEP57Q86XR8 500 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 C12orf76Q8N812 135 aaPredicted RBP19.5■□□□□ 0.71
CMTM3-204ENST00000562357 B3GALT6Q96L58 329 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 PPP1R10Q96QC0 940 aaKnown RBP19.5■□□□□ 0.71
CMTM3-204ENST00000562357 USP28Q96RU2 1077 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 TTPALQ9BTX7 342 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 MAN1C1Q9NR34 630 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 FNIP2Q9P278 1114 aa19.5■□□□□ 0.71
CMTM3-204ENST00000562357 SMIM28A0A1B0GU29 152 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 FAM86C2PA6NEL3 165 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 TRAK2O60296 914 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 ZNF131P52739 623 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 SLC39A14Q15043 492 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 KYAT1Q16773 422 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 DCLRE1AQ6PJP8 1040 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 DDX27Q96GQ7 796 aaKnown RBP19.49■□□□□ 0.71
CMTM3-204ENST00000562357 SNX27Q96L92 541 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 LRFN3Q9BTN0 628 aa19.49■□□□□ 0.71
CMTM3-204ENST00000562357 MORC2Q9Y6X9 1032 aaPredicted RBP19.49■□□□□ 0.71
CMTM3-204ENST00000562357 TMEM189-UBE2V1I3L0A0 370 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 C1RP00736 705 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 COL9A1P20849 921 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 SP100P23497 879 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-204ENST00000562357 STAT6P42226 847 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 NAB2Q15742 525 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-204ENST00000562357 CCDC149Q6ZUS6 474 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 SV2BQ7L1I2 683 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 ZBTB45Q96K62 511 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-204ENST00000562357 CLIC6Q96NY7 704 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 PLEKHA4Q9H4M7 779 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 POMKQ9H5K3 350 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 TBX20Q9UMR3 447 aa19.48■□□□□ 0.71
CMTM3-204ENST00000562357 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.48■□□□□ 0.71
CMTM3-204ENST00000562357 PRR33A8MZF0 331 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 WEE2P0C1S8 567 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 NASPP49321 788 aaPredicted RBP19.47■□□□□ 0.71
CMTM3-204ENST00000562357 CLCNKBP51801 687 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 MCL1Q07820 350 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 PSMD5Q16401 504 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 XKR4Q5GH76 650 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 RTP2Q5QGT7 225 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 C15orf39Q6ZRI6 1047 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 USP49Q70CQ1 688 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 GPR149Q86SP6 731 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 PALB2Q86YC2 1186 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 GLYCTKQ8IVS8 523 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 TDRD5Q8NAT2 981 aaKnown RBP19.47■□□□□ 0.71
CMTM3-204ENST00000562357 HDAC7Q8WUI4 952 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 PIK3R5Q8WYR1 880 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 KCNN1Q92952 543 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 CXCL16Q9H2A7 254 aa19.47■□□□□ 0.71
CMTM3-204ENST00000562357 CNTN3Q9P232 1028 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms