RNA–Protein interactions for RNA: ENST00000561271.1

CDC42BPB-208, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-208ENST00000561271 RPL17P18621 184 aaKnown RBP18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 PLCG1P19174 1290 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 SYT1P21579 422 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 GRM5P41594 1212 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 RTP2Q5QGT7 225 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 FAM173BQ6P4H8 233 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 PRSS55Q6UWB4 352 aaPredicted RBP18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 TMEM161BQ8NDZ6 487 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 SPIRE2Q8WWL2 714 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 PPP1R10Q96QC0 940 aaKnown RBP18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 REEP2Q9BRK0 252 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 CCDC94Q9BW85 323 aaPredicted RBP18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 GOLGA2P5Q9HBQ8 144 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 BLOC1S4Q9NUP1 217 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 KCND2Q9NZV8 630 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 ANKFY1Q9P2R3 1169 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 NR2E1Q9Y466 385 aa18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 RBM19Q9Y4C8 960 aaKnown RBP18.87■□□□□ 0.61
CDC42BPB-208ENST00000561271 K7ELQ4 463 aaPredicted RBP18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 SLC26A4O43511 780 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 MAPTP10636 758 aaKnown RBP18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 PROZP22891 400 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 LONP1P36776 959 aaKnown RBP18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 STRN3Q13033 797 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 ARSHQ5FYA8 562 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 ATAT1Q5SQI0 421 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 FAM171A1Q5VUB5 890 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 MPZL3Q6UWV2 235 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 HFE2Q6ZVN8 426 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 GPR149Q86SP6 731 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 EDAQ92838 391 aa18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 ZBTB45Q96K62 511 aaPredicted RBP18.86■□□□□ 0.61
CDC42BPB-208ENST00000561271 SPATA31D3P0C874 917 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 MCF2P10911 925 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 IGFBP6P24592 240 aaPredicted RBP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 MARCKSP29966 332 aaPredicted RBP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 SMTNP53814 917 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 YARSP54577 528 aaKnown RBP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 ZXDAP98168 799 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 MCM6Q14566 821 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 NOLC1Q14978 699 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 PTPAQ15257 358 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 PTPN21Q16825 1174 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 SPECC1Q5M775 1068 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 SPATA31D4Q6ZUB0 917 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 CEP57Q86XR8 500 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 PALB2Q86YC2 1186 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 TDRD5Q8NAT2 981 aaKnown RBP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 INTS4Q96HW7 963 aaKnown RBP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 SNX27Q96L92 541 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 NTPCRQ9BSD7 190 aaKnown RBP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 TCHPQ9BT92 498 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 TOPORSQ9NS56 1045 aaPredicted RBP18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 WDFY4Q6ZS81 3184 aa18.85■□□□□ 0.61
CDC42BPB-208ENST00000561271 RFPL2O75678 378 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 CLCNKBP51801 687 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 CEBPZQ03701 1054 aaKnown RBP18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 SOX4Q06945 474 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 PSMD5Q16401 504 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 USP49Q70CQ1 688 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 RAD54LQ92698 747 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 TTPALQ9BTX7 342 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 FNIP2Q9P278 1114 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 FBXO2Q9UK22 296 aaPredicted RBP18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 ODF2LQ9ULJ1 636 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 MTMR6Q9Y217 621 aa18.84■□□□□ 0.61
CDC42BPB-208ENST00000561271 SMIM28A0A1B0GU29 152 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 K7ENM7 598 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 MEFVO15553 781 aaPredicted RBP18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 TGM5O43548 720 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 TOM1L1O75674 476 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 FAM13AO94988 1023 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 BRD1O95696 1058 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 KRT18P05783 430 aaKnown RBP18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 NCKAP1LP55160 1127 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 CREMQ03060 361 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 SEZ6Q53EL9 994 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 TRIM67Q6ZTA4 783 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 CCDC149Q6ZUS6 474 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 GPR65Q8IYL9 337 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 C3orf58Q8NDZ4 430 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 PIK3R5Q8WYR1 880 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 LARP4BQ92615 738 aaKnown RBP18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 BICD1Q96G01 975 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 EPSTI1Q96J88 318 aa18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZMAT2Q96NC0 199 aaKnown RBP18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 LARSQ9P2J5 1176 aaKnown RBP18.83■□□□□ 0.6
CDC42BPB-208ENST00000561271 TMEM221A6NGB7 291 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 TMEM189-UBE2V1I3L0A0 370 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 I3L4J1 428 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 M0R296 226 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 B3GAT3O94766 335 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 ELAVL2Q12926 359 aaKnown RBP18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 XKR4Q5GH76 650 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 ELMSAN1Q6PJG2 1045 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 ALKAL1Q6UXT8 129 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 ZPBP2Q6X784 338 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 C15orf39Q6ZRI6 1047 aa18.82■□□□□ 0.6
CDC42BPB-208ENST00000561271 HAUS6Q7Z4H7 955 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms