RNA–Protein interactions for RNA: ENST00000561206.1

USP8-216, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 2

Gene USP8, Length 556 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-216ENST00000561206 HASPINQ8TF76 798 aa4.85□□□□□ -1.63
USP8-216ENST00000561206 RGMAQ96B86 450 aa4.85□□□□□ -1.63
USP8-216ENST00000561206 WNT8AQ9H1J5 351 aa4.85□□□□□ -1.63
USP8-216ENST00000561206 MS4A5Q9H3V2 200 aa4.85□□□□□ -1.63
USP8-216ENST00000561206 LRIT1Q9P2V4 623 aa4.85□□□□□ -1.63
USP8-216ENST00000561206 TMPRSS11EQ9UL52 423 aa4.85□□□□□ -1.63
USP8-216ENST00000561206 NUMBLQ9Y6R0 609 aa4.85□□□□□ -1.63
USP8-216ENST00000561206 PRSS38A1L453 326 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 LCHNA4D1U4 455 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 NTN1O95631 604 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 WT1P19544 449 aaPredicted RBP4.84□□□□□ -1.63
USP8-216ENST00000561206 MEF2AQ02078 507 aaPredicted RBP4.84□□□□□ -1.63
USP8-216ENST00000561206 PPARAQ07869 468 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 TCEA2Q15560 299 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 SLC41A1Q8IVJ1 513 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 NEU1Q99519 415 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 SPON1Q9HCB6 807 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 FLRT1Q9NZU1 646 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 EVLQ9UI08 416 aaPredicted RBP4.84□□□□□ -1.63
USP8-216ENST00000561206 LRP12Q9Y561 859 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 CD2APQ9Y5K6 639 aa4.84□□□□□ -1.63
USP8-216ENST00000561206 CYSRT1A8MQ03 144 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 TMEM127O75204 238 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 LTA4HP09960 611 aaKnown RBP4.83□□□□□ -1.64
USP8-216ENST00000561206 MANFP55145 182 aaKnown RBP4.83□□□□□ -1.64
USP8-216ENST00000561206 APBA1Q02410 837 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 EIF2B5Q13144 721 aaKnown RBP4.83□□□□□ -1.64
USP8-216ENST00000561206 FHL1Q13642 323 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 UBE3CQ15386 1083 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 TERF2Q15554 542 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 SRSF7Q16629 238 aaKnown RBP eCLIP4.83□□□□□ -1.64
USP8-216ENST00000561206 AGAP9Q5VTM2 703 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 ACTRT2Q8TDY3 377 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 SREK1Q8WXA9 508 aaKnown RBP4.83□□□□□ -1.64
USP8-216ENST00000561206 RSAD2Q8WXG1 361 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 SARAFQ96BY9 339 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 ZSWIM4Q9H7M6 989 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 TMEM74BQ9NUR3 256 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 PRSS50Q9UI38 385 aa4.83□□□□□ -1.64
USP8-216ENST00000561206 ZMYM3Q14202 1370 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 PRR23D1E9PI22 279 aaPredicted RBP4.82□□□□□ -1.64
USP8-216ENST00000561206 PRAMEF4O60810 478 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 PRR23D2P0DMB1 279 aaPredicted RBP4.82□□□□□ -1.64
USP8-216ENST00000561206 ITPKBP27987 946 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 LSP1P33241 339 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 OCRLQ01968 901 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 SEPT7Q16181 437 aaKnown RBP4.82□□□□□ -1.64
USP8-216ENST00000561206 ANKS6Q68DC2 871 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 OR14C36Q8NHC7 312 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 DDB2Q92466 427 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 CDC5LQ99459 802 aaKnown RBP4.82□□□□□ -1.64
USP8-216ENST00000561206 SPTLC3Q9NUV7 552 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 ASB6Q9NWX5 421 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 USP15Q9Y4E8 981 aaPredicted RBP4.82□□□□□ -1.64
USP8-216ENST00000561206 ENTPD2Q9Y5L3 495 aa4.82□□□□□ -1.64
USP8-216ENST00000561206 TBKBP1A7MCY6 615 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 KDM1AO60341 852 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 ITGA10O75578 1167 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 PRKCGP05129 697 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 LSSP48449 732 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 TRIM25Q14258 630 aaKnown RBP4.81□□□□□ -1.64
USP8-216ENST00000561206 C19orf54Q5BKX5 351 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 EFCAB12Q6NXP0 572 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 ABHD15Q6UXT9 468 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 PPM1KQ8N3J5 372 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 TMEM132CQ8N3T6 1108 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 SNX33Q8WV41 574 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 NINJ1Q92982 152 aa4.81□□□□□ -1.64
USP8-216ENST00000561206 GPR101Q96P66 508 aaPredicted RBP4.81□□□□□ -1.64
USP8-216ENST00000561206 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.81□□□□□ -1.64
USP8-216ENST00000561206 GASTP01350 101 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 ELANEP08246 267 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 CLEC2LP0C7M8 214 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 ADCYAP1R1P41586 468 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 SART3Q15020 963 aaKnown RBP4.8□□□□□ -1.64
USP8-216ENST00000561206 PCBP1Q15365 356 aaKnown RBP eCLIP4.8□□□□□ -1.64
USP8-216ENST00000561206 C21orf62-AS1Q17RA5 79 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 BMT2Q1RMZ1 405 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 TKFCQ3LXA3 575 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 CNNM4Q6P4Q7 775 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 FRMD7Q6ZUT3 714 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 HOMER1Q86YM7 354 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 RNF169Q8NCN4 708 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 TFAP2CQ92754 450 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 BOD1Q96IK1 185 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 RNPC3Q96LT9 517 aaKnown RBP4.8□□□□□ -1.64
USP8-216ENST00000561206 HEPHQ9BQS7 1158 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 PRDM12Q9H4Q4 367 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 GPRC5DQ9NZD1 345 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 CDY2AQ9Y6F7 541 aa4.8□□□□□ -1.64
USP8-216ENST00000561206 MOSPD3O75425 235 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 KRT10P13645 584 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 SCNN1BP51168 640 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 RAPGEF1Q13905 1077 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 PITRM1Q5JRX3 1037 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 B3GNTL1Q67FW5 361 aaPredicted RBP4.79□□□□□ -1.64
USP8-216ENST00000561206 C16orf86Q6ZW13 317 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 NIM1KQ8IY84 436 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 OR2W6PQ8NHA6 318 aa4.79□□□□□ -1.64
USP8-216ENST00000561206 MDM1Q8TC05 714 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms