RNA–Protein interactions for RNA: ENST00000560975.5

TPM1-228, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 2,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-228ENST00000560975 SNX30Q5VWJ9 437 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 MTHFD1LQ6UB35 978 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 DSTYKQ6XUX3 929 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 ZFP69BQ9UJL9 534 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 ATF5Q9Y2D1 282 aaPredicted RBP17.58■□□□□ 0.4
TPM1-228ENST00000560975 ZBTB39O15060 712 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 KRT36O76013 467 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 ASMTLO95671 621 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 IVDP26440 423 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 MARK3P27448 753 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 VHLP40337 213 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 RASSF2P50749 326 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 KCNQ4P56696 695 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 SLFN12Q8IYM2 578 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 SCG3Q8WXD2 468 aaKnown RBP17.58■□□□□ 0.4
TPM1-228ENST00000560975 FAM136AQ96C01 138 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 FGD4Q96M96 766 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 CCDC77Q9BR77 488 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 UBN1Q9NPG3 1134 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 STOML1Q9UBI4 398 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 RABGAP1Q9Y3P9 1069 aa17.58■□□□□ 0.4
TPM1-228ENST00000560975 SMAPO00193 183 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 RNF8O76064 485 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 SLC5A9Q2M3M2 681 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 IRGCQ6NXR0 463 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 PPP1R18Q6NYC8 613 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 ZNF804AQ7Z570 1209 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 PHLDB2Q86SQ0 1253 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 MTDHQ86UE4 582 aaKnown RBP17.57■□□□□ 0.4
TPM1-228ENST00000560975 CCDC125Q86Z20 511 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 FBXO41Q8TF61 875 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 NRG4Q8WWG1 115 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 SPIRE2Q8WWL2 714 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 MIPEPQ99797 713 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 HERPUD2Q9BSE4 406 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 NPHS2Q9NP85 383 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 LGALS13Q9UHV8 139 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 DCTN4Q9UJW0 460 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 NAV1Q8NEY1 1877 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 SPATA31A1Q5TZJ5 1347 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 ZBTB5O15062 677 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 KCNA3P22001 575 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 DLG4P78352 724 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 CDR2Q01850 454 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 ZNF653Q96CK0 615 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 EPAS1Q99814 870 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 HEMGNQ9BXL5 484 aa17.57■□□□□ 0.4
TPM1-228ENST00000560975 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.57■□□□□ 0.4
TPM1-228ENST00000560975 EXOC3O60645 756 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 BCRP11274 1271 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 KRT15P19012 456 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 RRM1P23921 792 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 SNAP25P60880 206 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 C4orf50Q6ZRC1 276 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 CCNJLQ8IV13 435 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 C12orf50Q8NA57 414 aaPredicted RBP17.56■□□□□ 0.4
TPM1-228ENST00000560975 C10orf82Q8WW14 230 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 NUMBLQ9Y6R0 609 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 ARFGEF1Q9Y6D6 1849 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 DDX60LQ5H9U9 1706 aaKnown RBP17.56■□□□□ 0.4
TPM1-228ENST00000560975 EXOC1LA0A1B0GW35 172 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 WDR91A4D1P6 747 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 PYGLP06737 847 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 PTPN4P29074 926 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 RPA3P35244 121 aaPredicted RBP17.56■□□□□ 0.4
TPM1-228ENST00000560975 CACNA2D1P54289 1103 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 SPARCL1Q14515 664 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 PDCD2Q16342 344 aaPredicted RBP17.56■□□□□ 0.4
TPM1-228ENST00000560975 CMPK2Q5EBM0 449 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 TBC1D9BQ66K14 1250 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 RINT1Q6NUQ1 792 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 HS2ST1Q7LGA3 356 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 NLRP9Q7RTR0 991 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 ETNPPLQ8TBG4 499 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 GORASP1Q9BQQ3 440 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 PCMTD2Q9NV79 361 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 R3HDM2Q9Y2K5 976 aaKnown RBP17.56■□□□□ 0.4
TPM1-228ENST00000560975 PCDHA1Q9Y5I3 950 aa17.56■□□□□ 0.4
TPM1-228ENST00000560975 EDF1O60869 148 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 ERFP50548 548 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 ARHGAP4P98171 946 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 RFX8Q6ZV50 586 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 B4GALNT2Q8NHY0 566 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 SLC5A5Q92911 643 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 P2RX7Q99572 595 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 DDX50Q9BQ39 737 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 TRAIPQ9BWF2 469 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 TRABDQ9H4I3 376 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 PCIF1Q9H4Z3 704 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 SDAD1Q9NVU7 687 aaKnown RBP eCLIP17.55■□□□□ 0.4
TPM1-228ENST00000560975 LRCH1Q9Y2L9 728 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 CAPN9O14815 690 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 TAL1P17542 331 aaPredicted RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 CA4P22748 312 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 OVGP1Q12889 678 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 KPNB1Q14974 876 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 SLC1A5Q15758 541 aa17.55■□□□□ 0.4
TPM1-228ENST00000560975 PKN2Q16513 984 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 NOP9Q86U38 636 aaKnown RBP17.55■□□□□ 0.4
TPM1-228ENST00000560975 CYP2W1Q8TAV3 490 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms