RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 FAM13AO94988 1023 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 TFRCP02786 760 aaKnown RBP6.02□□□□□ -1.45
ZEB1-220ENST00000560909 IDEP14735 1019 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 PRCPP42785 496 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 DNM2P50570 870 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 GPC3P51654 580 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 CLCN3P51790 818 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 CASP5P51878 434 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 EFNA5P52803 228 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 PEX3P56589 373 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 SOX10P56693 466 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 ZNF200P98182 395 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-220ENST00000560909 PTK2Q05397 1052 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 TYRO3Q06418 890 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 MGAT3Q09327 533 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 CAPSQ13938 189 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 MYBPC2Q14324 1141 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 PCBP1Q15365 356 aaKnown RBP eCLIP6.02□□□□□ -1.45
ZEB1-220ENST00000560909 ODR4Q5SWX8 454 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 FAM102BQ5T8I3 360 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 LRSAM1Q6UWE0 723 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 SHISA2Q6UWI4 295 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 SLC39A5Q6ZMH5 540 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 RUFY4Q6ZNE9 571 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 HAUS6Q7Z4H7 955 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 SRGAP1Q7Z6B7 1085 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 C12orf56Q8IXR9 622 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 LRRC71Q8N4P6 559 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 MYCT1Q8N699 235 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 GLIS3Q8NEA6 775 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 ZNF417Q8TAU3 575 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 WNT8BQ93098 351 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 CCDC47Q96A33 483 aaKnown RBP6.02□□□□□ -1.45
ZEB1-220ENST00000560909 ZBTB10Q96DT7 871 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 DHTKD1Q96HY7 919 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-220ENST00000560909 ZNF587Q96SQ5 575 aaPredicted RBP6.02□□□□□ -1.45
ZEB1-220ENST00000560909 FGFBP2Q9BYJ0 223 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 KCTD10Q9H3F6 313 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 POLD4Q9HCU8 107 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 STARD7Q9NQZ5 370 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 EXOC1Q9NV70 894 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 DMAC2Q9NW81 257 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 TRAF3IP3Q9Y228 551 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 GDAQ9Y2T3 454 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 STYXL1Q9Y6J8 313 aa6.02□□□□□ -1.45
ZEB1-220ENST00000560909 SYCE3A1L190 88 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 ACKR2O00590 384 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 PDXKO00764 312 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 ABLIM1O14639 778 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 TGFB1I1O43294 461 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 B4GALT4O60513 344 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CHRNA1P02708 482 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 KRT18P05783 430 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CCDC192P0DO97 292 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CYP2C9P11712 490 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 DARSP14868 501 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 PROZP22891 400 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CCNE1P24864 410 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 NMT1P30419 496 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CRYBB1P53674 252 aaPredicted RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 SMTNP53814 917 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 IGBP1P78318 339 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 MBTD1Q05BQ5 628 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 RAD51AP2Q09MP3 1159 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 DMP1Q13316 513 aaPredicted RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 TFDP1Q14186 410 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 GPNMBQ14956 572 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 NCAPHQ15003 741 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 IQCB1Q15051 598 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 STX1AQ16623 288 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 PTGISQ16647 500 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 DPCR1Q3MIW9 517 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 L1TD1Q5T7N2 865 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 TTI2Q6NXR4 508 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 SASS6Q6UVJ0 657 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 ZPBP2Q6X784 338 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 TRMT1LQ7Z2T5 733 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 NECAB2Q7Z6G3 386 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 SLC9A9Q8IVB4 645 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 MAP4K3Q8IVH8 894 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 KSR1Q8IVT5 923 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 FAM178BQ8IXR5 827 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 MYOCDQ8IZQ8 938 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CAGE1Q8TC20 777 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 ENOX1Q8TC92 643 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 DIS3LQ8TF46 1054 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 DNAJB3Q8WWF6 145 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 HPS3Q969F9 1004 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 IFT74Q96LB3 600 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 PRIMPOLQ96LW4 560 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CCDC43Q96MW1 224 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 MAP7D2Q96T17 732 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 CELF4Q9BZC1 486 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 SENP6Q9GZR1 1112 aaPredicted RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 TRPV6Q9H1D0 765 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 C2orf40Q9H1Z8 148 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 MINDY3Q9H8M7 445 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 MRPL44Q9H9J2 332 aaKnown RBP6.01□□□□□ -1.45
ZEB1-220ENST00000560909 SUGCTQ9HAC7 445 aa6.01□□□□□ -1.45
ZEB1-220ENST00000560909 PTPRHQ9HD43 1115 aa6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms