RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 ADCK5Q3MIX3 580 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 WIPI1Q5MNZ9 446 aaPredicted RBP7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 C4orf50Q6ZRC1 276 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 FMR1NBQ8N0W7 255 aaPredicted RBP7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 TC2NQ8N9U0 490 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 STAMBPL1Q96FJ0 436 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 TSC22D3Q99576 134 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 GORASP1Q9BQQ3 440 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 LRFN3Q9BTN0 628 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 OVOS2A0A0G2JMS6 1433 aa7.27□□□□□ -1.25
TSPAN3-209ENST00000560715 B4E171 279 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 DLX3O60479 287 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 GAS7O60861 476 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ATP6V1G2O95670 118 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 GNAT1P11488 350 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 NME1P15531 152 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 LSP1P33241 339 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 DCAF7P61962 342 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 PLIN5Q00G26 463 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 BLMHQ13867 455 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 PDCD1Q15116 288 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 LRRC23Q53EV4 343 aaPredicted RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF569Q5MCW4 686 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 CATSPER4Q7RTX7 472 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 RAB44Q7Z6P3 723 aaPredicted RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 NBPF15Q8N660 670 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ARL6IP6Q8N6S5 226 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 USHBP1Q8N6Y0 703 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 FSIP1Q8NA03 581 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ADAMTS18Q8TE60 1221 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 GAS2L1Q99501 681 aaPredicted RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 DPH2Q9BQC3 489 aaPredicted RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 LZTS2Q9BRK4 669 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ZCCHC2Q9C0B9 1178 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 NOD2Q9HC29 1040 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 LZTFL1Q9NQ48 299 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 SRRM3A6NNA2 597 aaPredicted RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 RHPN2P1A8MT19 583 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM232C9JQI7 657 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 TFRCP02786 760 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ATP2A2P16615 1042 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 RCAN1P53805 252 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 MTX1Q13505 466 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 DBN1Q16643 649 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 PLBD1Q6P4A8 553 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 CCHCR1Q8TD31 782 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 RBM17Q96I25 401 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 PNMA5Q96PV4 448 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 NAPGQ99747 312 aaPredicted RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 MAGEH1Q9H213 219 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 RANBP17Q9H2T7 1088 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 TBC1D29Q9UFV1 150 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 PCDHGB4Q9UN71 923 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 CRYBG1Q9Y4K1 1723 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 POM121BA6NF01 834 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 POLR2FP61218 127 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 RPS26P62854 115 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 MECOMQ03112 1051 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 TRIM29Q14134 588 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 PKDCCQ504Y2 493 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ANKRD20A8PQ5CZ79 823 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ATL3Q6DD88 541 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 NPNTQ6UXI9 565 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 JAKMIP2Q96AA8 810 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 DTNBP1Q96EV8 351 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 SLC6A18Q96N87 628 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 ZNF570Q96NI8 536 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 IQCGQ9H095 443 aaKnown RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 MMADHCQ9H3L0 296 aaPredicted RBP7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM39AQ9NV64 488 aa7.26□□□□□ -1.25
TSPAN3-209ENST00000560715 TMEM94Q12767 1356 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 SIPA1L3O60292 1781 aaPredicted RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 PXDNLA1KZ92 1463 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ABCC6O95255 1503 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ADAMTS7Q9UKP4 1686 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 SLC22A31A6NKX4 558 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CHURC1-FNTBB4DL54 471 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 DNM1LO00429 736 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 RIMBP2O15034 1052 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 KRT37O76014 449 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 PAPLNO95428 1278 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ANP32DO95626 131 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 FAM107AO95990 144 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 HOXB7P09629 217 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ATP4AP20648 1035 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ADSLP30566 484 aaPredicted RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 AMPD2Q01433 879 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 RPL6Q02878 288 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CEBPZQ03701 1054 aaKnown RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CLN3Q13286 438 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 PRKG1Q13976 671 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ANKRD1Q15327 319 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 PTGISQ16647 500 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CCDC57Q2TAC2 916 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 ATAT1Q5SQI0 421 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 EMC10Q5UCC4 262 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 LIN54Q6MZP7 749 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 LLGL2Q6P1M3 1020 aa7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CCNI2Q6ZMN8 369 aaPredicted RBP7.25□□□□□ -1.25
TSPAN3-209ENST00000560715 CEP97Q8IW35 865 aa7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms