RNA–Protein interactions for RNA: ENST00000560564.1

SPG21-211, Transcript of SPG21, maspardin, humanhuman

TSL 4

Gene SPG21, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG21-211ENST00000560564 CMASQ8NFW8 434 aaPredicted RBP17.78■□□□□ 0.44
SPG21-211ENST00000560564 CDK5RAP3Q96JB5 506 aa17.78■□□□□ 0.44
SPG21-211ENST00000560564 RHOBTB2Q9BYZ6 727 aa17.78■□□□□ 0.44
SPG21-211ENST00000560564 MAN1C1Q9NR34 630 aa17.78■□□□□ 0.44
SPG21-211ENST00000560564 FNIP2Q9P278 1114 aa17.78■□□□□ 0.44
SPG21-211ENST00000560564 NR2E1Q9Y466 385 aa17.78■□□□□ 0.44
SPG21-211ENST00000560564 SF3B1O75533 1304 aaKnown RBP eCLIP17.77■□□□□ 0.44
SPG21-211ENST00000560564 MYH15Q9Y2K3 1946 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 NPHP3-ACAD11A0A0J9YXS1 232 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 VPS37CA5D8V6 355 aaPredicted RBP17.77■□□□□ 0.44
SPG21-211ENST00000560564 TMEM189-UBE2V1I3L0A0 370 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 TADA2AO75478 443 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 GLUD1P00367 558 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 MAPTP10636 758 aaKnown RBP17.77■□□□□ 0.44
SPG21-211ENST00000560564 SYT1P21579 422 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 LONP1P36776 959 aaKnown RBP17.77■□□□□ 0.44
SPG21-211ENST00000560564 UBA7P41226 1012 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 PTPN21Q16825 1174 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 LILRA6Q6PI73 481 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 C15orf39Q6ZRI6 1047 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 TRIM67Q6ZTA4 783 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 HASPINQ8TF76 798 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 RIN2Q8WYP3 895 aaPredicted RBP17.77■□□□□ 0.44
SPG21-211ENST00000560564 INTS4Q96HW7 963 aaKnown RBP17.77■□□□□ 0.44
SPG21-211ENST00000560564 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.77■□□□□ 0.44
SPG21-211ENST00000560564 USTQ9Y2C2 406 aa17.77■□□□□ 0.44
SPG21-211ENST00000560564 KMT2EQ8IZD2 1858 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 MCF2P10911 925 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 RPL17P18621 184 aaKnown RBP17.76■□□□□ 0.43
SPG21-211ENST00000560564 PLCG1P19174 1290 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 NCKAP1LP55160 1127 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 CACNB1Q02641 598 aaPredicted RBP17.76■□□□□ 0.43
SPG21-211ENST00000560564 SOX4Q06945 474 aaPredicted RBP17.76■□□□□ 0.43
SPG21-211ENST00000560564 MPZL3Q6UWV2 235 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 APBB1IPQ7Z5R6 666 aaPredicted RBP17.76■□□□□ 0.43
SPG21-211ENST00000560564 BMP8AQ7Z5Y6 402 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 PIK3R5Q8WYR1 880 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 ZBTB45Q96K62 511 aaPredicted RBP17.76■□□□□ 0.43
SPG21-211ENST00000560564 SNX27Q96L92 541 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 ZMAT2Q96NC0 199 aaKnown RBP17.76■□□□□ 0.43
SPG21-211ENST00000560564 REEP2Q9BRK0 252 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 ODF2LQ9ULJ1 636 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 HCN4Q9Y3Q4 1203 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 CLIC4Q9Y696 253 aa17.76■□□□□ 0.43
SPG21-211ENST00000560564 SMIM28A0A1B0GU29 152 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 TGM5O43548 720 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 RFPL2O75678 378 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 ZNF131P52739 623 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 KARSQ15046 597 aaKnown RBP17.75■□□□□ 0.43
SPG21-211ENST00000560564 UPP1Q16831 310 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 FAM171A1Q5VUB5 890 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 FAM173BQ6P4H8 233 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 PRSS55Q6UWB4 352 aaPredicted RBP17.75■□□□□ 0.43
SPG21-211ENST00000560564 USP49Q70CQ1 688 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 ZDHHC14Q8IZN3 488 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 C3orf58Q8NDZ4 430 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 LNX1Q8TBB1 728 aaPredicted RBP17.75■□□□□ 0.43
SPG21-211ENST00000560564 HDAC7Q8WUI4 952 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 ZNF707Q96C28 371 aaPredicted RBP17.75■□□□□ 0.43
SPG21-211ENST00000560564 ASIC4Q96FT7 647 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 CALML4Q96GE6 196 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 TTPALQ9BTX7 342 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 CCDC94Q9BW85 323 aaPredicted RBP17.75■□□□□ 0.43
SPG21-211ENST00000560564 CCSER1Q9C0I3 900 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 GOLGA2P5Q9HBQ8 144 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 TSHZ2Q9NRE2 1034 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 KCNG1Q9UIX4 513 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 MTMR6Q9Y217 621 aa17.75■□□□□ 0.43
SPG21-211ENST00000560564 TOM1L1O75674 476 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 CLCNKBP51801 687 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 SMTNP53814 917 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 OSTNP61366 133 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 CREMQ03060 361 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 SIGLEC14Q08ET2 396 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 ZPBP2Q6X784 338 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 ZBTB33Q86T24 672 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 GPBP1Q86WP2 473 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 PALB2Q86YC2 1186 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 TDRD5Q8NAT2 981 aaKnown RBP17.74■□□□□ 0.43
SPG21-211ENST00000560564 RAD54LQ92698 747 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 FIZ1Q96SL8 496 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 CLSTN3Q9BQT9 956 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 HAPLN2Q9GZV7 340 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 PLEKHA4Q9H4M7 779 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 TOPORSQ9NS56 1045 aaPredicted RBP17.74■□□□□ 0.43
SPG21-211ENST00000560564 CNTN3Q9P232 1028 aa17.74■□□□□ 0.43
SPG21-211ENST00000560564 LARSQ9P2J5 1176 aaKnown RBP17.74■□□□□ 0.43
SPG21-211ENST00000560564 FBXO2Q9UK22 296 aaPredicted RBP17.74■□□□□ 0.43
SPG21-211ENST00000560564 ANK1P16157 1881 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 NOTCH4Q99466 2003 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 TMEM221A6NGB7 291 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 K7ELQ4 463 aaPredicted RBP17.73■□□□□ 0.43
SPG21-211ENST00000560564 M0R296 226 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 SPATA31D3P0C874 917 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 KCNE1P15382 129 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 FGFR3P22607 806 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 PLA2G5P39877 138 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 MCL1Q07820 350 aa17.73■□□□□ 0.43
SPG21-211ENST00000560564 ELAVL2Q12926 359 aaKnown RBP17.73■□□□□ 0.43
SPG21-211ENST00000560564 MCM6Q14566 821 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms