RNA–Protein interactions for RNA: ENST00000560549.5

TMOD3-207, Transcript of tropomodulin 3, humanhuman

TSL 1 (best)

Gene TMOD3, Length 1,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMOD3-207ENST00000560549 C2orf69Q8N8R5 385 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 LOXL4Q96JB6 756 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 GNRHR2Q96P88 292 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 STK31Q9BXU1 1019 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 KIAA1683Q9H0B3 1180 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 USP44Q9H0E7 712 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 CHMP4BQ9H444 224 aaKnown RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 TCEAL9Q9UHQ7 104 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 SLC4A7Q9Y6M7 1214 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 LTN1O94822 1766 aa5.25□□□□□ -1.57
TMOD3-207ENST00000560549 TNKS1BP1Q9C0C2 1729 aaKnown RBP5.25□□□□□ -1.57
TMOD3-207ENST00000560549 HEG1Q9ULI3 1381 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 RGPD2P0DJD1 1756 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 NWD2Q9ULI1 1742 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 PNMA6EA0A0J9YXQ4 647 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 HMGB1P1B2RPK0 211 aaPredicted RBP5.24□□□□□ -1.57
TMOD3-207ENST00000560549 MATN2O00339 956 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 MATN3O15232 486 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 FOXP2O15409 715 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 TGM5O43548 720 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 KRT37O76014 449 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 PAX3P23760 479 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 ATP8B2P98198 1209 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 SLC39A6Q13433 755 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 C1orf141Q5JVX7 400 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 KRTAP5-3Q6L8H2 238 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 GLB1LQ6UWU2 654 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 EP400NLQ6ZTU2 488 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 NME8Q8N427 588 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 COG1Q8WTW3 980 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 CHTF18Q8WVB6 975 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 DVL3Q92997 716 aaPredicted RBP5.24□□□□□ -1.57
TMOD3-207ENST00000560549 ZDHHC5Q9C0B5 715 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 SPTLC3Q9NUV7 552 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 CDC42EP3Q9UKI2 254 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 PLCH1Q4KWH8 1693 aa5.24□□□□□ -1.57
TMOD3-207ENST00000560549 COL14A1Q05707 1796 aaKnown RBP5.23□□□□□ -1.57
TMOD3-207ENST00000560549 ADCY9O60503 1353 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 MEGF6O75095 1541 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 SLIT2O94813 1529 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 SOS1Q07889 1333 aaPredicted RBP5.23□□□□□ -1.57
TMOD3-207ENST00000560549 LMO7Q8WWI1 1683 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 BCL9LQ86UU0 1499 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 PTPDC1A2A3K4 754 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 GOLGA6L22H0YM25 854 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 CYP27B1O15528 508 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 APPP05067 770 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 PHKG2P15735 406 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 ECE1P42892 770 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 ETV4P43268 484 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 TEFQ10587 303 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 USP10Q14694 798 aaKnown RBP5.23□□□□□ -1.57
TMOD3-207ENST00000560549 WDR72Q3MJ13 1102 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 BMP2KLQ5H9B9 411 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 BEND3Q5T5X7 828 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 TMEM200BQ69YZ2 307 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 UNC5CLQ8IV45 518 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 OR2W6PQ8NHA6 318 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 BOCQ9BWV1 1114 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 BTBD2Q9BX70 525 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 C22orf23Q9BZE7 217 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 OR10A5Q9H207 317 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 PRDM11Q9NQV5 511 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 MCM8Q9UJA3 840 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 TRPC5Q9UL62 973 aaPredicted RBP5.23□□□□□ -1.57
TMOD3-207ENST00000560549 LRRFIP2Q9Y608 721 aaKnown RBP5.23□□□□□ -1.57
TMOD3-207ENST00000560549 KDM6AO15550 1401 aaPredicted RBP5.23□□□□□ -1.57
TMOD3-207ENST00000560549 COL18A1P39060 1754 aa5.23□□□□□ -1.57
TMOD3-207ENST00000560549 CAMTA1Q9Y6Y1 1673 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 PI4KAP2A4QPH2 592 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 PATE3B3GLJ2 98 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 TSPAN6O43657 245 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 KATNA1O75449 491 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 FKBP9O95302 570 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 GNAI2P04899 355 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 HOXB7P09629 217 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 KCNQ1P51787 676 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 MTMR1Q13613 665 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 PUM1Q14671 1186 aaKnown RBP eCLIP5.22□□□□□ -1.57
TMOD3-207ENST00000560549 TTC22Q5TAA0 569 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 SLFN13Q68D06 897 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 FKBP9P1Q75LS8 142 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 C11orf96Q7Z7L8 435 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 PI4KAP1Q8N8J0 262 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 HIPK4Q8NE63 616 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 ATL2Q8NHH9 583 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 WDR66Q8TBY9 1149 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 ERCC4Q92889 916 aaPredicted RBP5.22□□□□□ -1.57
TMOD3-207ENST00000560549 ASPSCR1Q9BZE9 553 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 IFT22Q9H7X7 185 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.22□□□□□ -1.57
TMOD3-207ENST00000560549 VTA1Q9NP79 307 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 EMC7Q9NPA0 242 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 OXSMQ9NWU1 459 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 THG1LQ9NWX6 298 aaKnown RBP5.22□□□□□ -1.57
TMOD3-207ENST00000560549 EXOC6BQ9Y2D4 811 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 TSC22D4Q9Y3Q8 395 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 ASB1Q9Y576 335 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 COMMD10Q9Y6G5 202 aa5.22□□□□□ -1.57
TMOD3-207ENST00000560549 NRAPQ86VF7 1730 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms