RNA–Protein interactions for RNA: ENST00000560472.1

RCOR1-204, Transcript of REST corepressor 1, human

TSL 3

Gene RCOR1, Length 411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RCOR1-204	ENST00000560472	BTBD19	C9JJ37	291 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	FAM229A	H3BQW9	127 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	IRS4	O14654	1257 aa	Predicted RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ERC2	O15083	957 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	SLC7A4	O43246	635 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	EFS	O43281	561 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	SART1	O43290	800 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ZNF254	O75437	659 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ABLIM3	O94929	683 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	TGDS	O95455	350 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	IL33	O95760	270 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	PAH	P00439	452 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ITGB1	P05556	798 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	PARP1	P09874	1014 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	SPATA31C1	P0DKV0	1188 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ATP5D	P30049	168 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	PHKA1	P46020	1223 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	NOP2	P46087	812 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	BLVRA	P53004	296 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	RRP1	P56182	461 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	POLR2F	P61218	127 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	REL	Q04864	619 aa	Predicted RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	FAP	Q12884	760 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	PPFIA1	Q13136	1202 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	TUBA3C	Q13748	450 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	RCN1	Q15293	331 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	GPR158	Q5T848	1215 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	MEI1	Q5TIA1	1274 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	STRIP1	Q5VSL9	837 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	SFMBT2	Q5VUG0	894 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	IER5	Q5VY09	327 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	RNF219	Q5W0B1	726 aa	Predicted RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CCDC81	Q6ZN84	652 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	PLEKHM3	Q6ZWE6	761 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CEP68	Q76N32	757 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	SPATA24	Q86W54	205 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	NRSN1	Q8IZ57	195 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CMTR1	Q8N1G2	835 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CAMKK1	Q8N5S9	505 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ATP11C	Q8NB49	1132 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	PCSK9	Q8NBP7	692 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	MAFA	Q8NHW3	353 aa	Predicted RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CPLX3	Q8WVH0	158 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	POF1B	Q8WVV4	589 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CDKL2	Q92772	493 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ZBED3	Q96IU2	234 aa	Predicted RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	HSH2D	Q96JZ2	352 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CEP295NL	Q96MC4	621 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	RMDN3	Q96TC7	470 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	CDX2	Q99626	313 aa	Predicted RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	MDFI	Q99750	246 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	TTPAL	Q9BTX7	342 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	MROH8	Q9H579	483 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	LUC7L	Q9NQ29	371 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	INTS10	Q9NVR2	710 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	TBC1D7	Q9P0N9	293 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	ZNF624	Q9P2J8	865 aa	Predicted RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	EXTL2	Q9UBQ6	330 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	STK39	Q9UEW8	545 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	HPCAL4	Q9UM19	191 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	COG5	Q9UP83	839 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	FNDC3A	Q9Y2H6	1198 aa	Known RBP	4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472	PCDHAC2	Q9Y5I4	1007 aa		4.84	□□□□□ -1.63
RCOR1-204	ENST00000560472		B4DLN1	442 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472		H7C0S8	307 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	ELL2	O00472	640 aa	Predicted RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	CETN3	O15182	167 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	STX6	O43752	255 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	PDE8A	O60658	829 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	MAF	O75444	373 aa	Predicted RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	APOA4	P06727	396 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	ARF4	P18085	180 aa	Predicted RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	CYP11B2	P19099	503 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	PRKAR1B	P31321	381 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	CSTF2	P33240	577 aa	Known RBP eCLIP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	CDR1	P51861	262 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	ATXN1	P54253	815 aa	Known RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	UBXN1	Q04323	297 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	BTK	Q06187	659 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	RUNX1T1	Q06455	604 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	GABPB1	Q06547	395 aa	Predicted RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	ADCY1	Q08828	1119 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	MAP3K12	Q12852	859 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	LAPTM5	Q13571	262 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	MTMR1	Q13613	665 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	PDE3A	Q14432	1141 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	PTPN21	Q16825	1174 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	IMMT	Q16891	758 aa	Known RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	SHROOM1	Q2M3G4	852 aa	Predicted RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	VWA3B	Q502W6	1294 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	HHAT	Q5VTY9	493 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	FAM109B	Q6ICB4	259 aa	Predicted RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	C17orf99	Q6UX52	265 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	PPP1R21	Q6ZMI0	780 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	PPP1R3F	Q6ZSY5	799 aa	Predicted RBP	4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	ZNF438	Q7Z4V0	828 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	ZER1	Q7Z7L7	766 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	TMEM110	Q86TL2	294 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	UNC45B	Q8IWX7	931 aa		4.83	□□□□□ -1.64
RCOR1-204	ENST00000560472	AFAP1L2	Q8N4X5	818 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms