RNA–Protein interactions for RNA: ENST00000560462.1

HERC1-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 647 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-208ENST00000560462 PXMP2Q9NR77 195 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 SSX2IPQ9Y2D8 614 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 BOD1L1Q8NFC6 3051 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 ZBED9Q6R2W3 1325 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 WDR19Q8NEZ3 1342 aa7.41□□□□□ -1.22
HERC1-208ENST00000560462 E9PAM4 449 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 TLX3O43711 291 aaPredicted RBP7.4□□□□□ -1.22
HERC1-208ENST00000560462 SH3BP5O60239 455 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 PRDM1O75626 825 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 C1RP00736 705 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 GALTP07902 379 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 TSPY3P0CV98 308 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 TSPY8P0CW00 308 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 RPL17P18621 184 aaKnown RBP7.4□□□□□ -1.22
HERC1-208ENST00000560462 MARK3P27448 753 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 MLLT6P55198 1093 aaPredicted RBP7.4□□□□□ -1.22
HERC1-208ENST00000560462 TLE3Q04726 772 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 NFATC3Q12968 1075 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 MRPL58Q14197 206 aaKnown RBP7.4□□□□□ -1.22
HERC1-208ENST00000560462 DSC3Q14574 896 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 TTF1Q15361 905 aaPredicted RBP7.4□□□□□ -1.22
HERC1-208ENST00000560462 WDR44Q5JSH3 913 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 ZNF746Q6NUN9 644 aaPredicted RBP7.4□□□□□ -1.22
HERC1-208ENST00000560462 METTL7BQ6UX53 244 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 CYFIP1Q7L576 1253 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 C11orf74Q86VG3 221 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 VSIG10LQ86VR7 867 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 ECHDC2Q86YB7 292 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 MAP4K3Q8IVH8 894 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 SYNPOQ8N3V7 929 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 NME8Q8N427 588 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 CAMKK1Q8N5S9 505 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 TMEM40Q8WWA1 233 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 ING5Q8WYH8 240 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 PI4K2AQ9BTU6 479 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 SLC6A16Q9GZN6 736 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 LRRC4CQ9HCJ2 640 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.4□□□□□ -1.224e-7■■■■■ 292.3
HERC1-208ENST00000560462 ZNF358Q9NW07 568 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 GDE1Q9NZC3 331 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 DBNLQ9UJU6 430 aaKnown RBP7.4□□□□□ -1.22
HERC1-208ENST00000560462 STX8Q9UNK0 236 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 SLC4A4Q9Y6R1 1079 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 ABCB11O95342 1321 aa7.4□□□□□ -1.22
HERC1-208ENST00000560462 ABCA2Q9BZC7 2435 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 WDR81Q562E7 1941 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 KIF26AQ9ULI4 1882 aaPredicted RBP7.39□□□□□ -1.23
HERC1-208ENST00000560462 PLIN4Q96Q06 1357 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 BLACEA4D250 179 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 RRN3P2A6NIE6 340 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 SCAMP3O14828 347 aaKnown RBP7.39□□□□□ -1.23
HERC1-208ENST00000560462 BACH1O14867 736 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 TGM5O43548 720 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 NDUFB5O43674 189 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 HSPD1P10809 573 aaKnown RBP7.39□□□□□ -1.23
HERC1-208ENST00000560462 TNFRSF8P28908 595 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 GDI1P31150 447 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 SLC11A1P49279 550 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 DHPSP49366 369 aaPredicted RBP7.39□□□□□ -1.23
HERC1-208ENST00000560462 SEMG2Q02383 582 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 SP4Q02446 784 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 NEDD9Q14511 834 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 PREPLQ4J6C6 727 aaPredicted RBP7.39□□□□□ -1.23
HERC1-208ENST00000560462 CAPN12Q6ZSI9 719 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 NEDD1Q8NHV4 660 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 DCAF4Q8WV16 495 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 NXPE2Q96DL1 559 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 MCRS1Q96EZ8 462 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 APOL6Q9BWW8 343 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 FZD8Q9H461 694 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 TLR7Q9NYK1 1049 aaKnown RBP7.39□□□□□ -1.23
HERC1-208ENST00000560462 ERAP1Q9NZ08 941 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 KCNH3Q9ULD8 1083 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 POLIQ9UNA4 740 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 PCDHA2Q9Y5H9 948 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 NAV3Q8IVL0 2385 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 PTPRBP23467 1997 aa7.39□□□□□ -1.23
HERC1-208ENST00000560462 COL4A2P08572 1712 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 TLN1Q9Y490 2541 aaKnown RBP7.38□□□□□ -1.23
HERC1-208ENST00000560462 CLEC18AA5D8T8 446 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 FAM149AA5PLN7 773 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 MINDY4BA8MYZ0 360 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 ATG13O75143 517 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 XYLBO75191 536 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 SOD2P04179 222 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 CFIP05156 583 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 HNRNPA1P09651 372 aaKnown RBP eCLIP7.38□□□□□ -1.23
HERC1-208ENST00000560462 KPNA1P52294 538 aaPredicted RBP7.38□□□□□ -1.23
HERC1-208ENST00000560462 MMRN1Q13201 1228 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 SLC14A1Q13336 389 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 MTX1Q13505 466 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 CCINQ13939 588 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 TSNAXIP1Q2TAA8 658 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 SBK1Q52WX2 424 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 PKN3Q6P5Z2 889 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 SLC23A3Q6PIS1 610 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 CLEC18BQ6UXF7 455 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 GLRX5Q86SX6 157 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 MCF2L2Q86YR7 1114 aa7.38□□□□□ -1.23
HERC1-208ENST00000560462 TMC8Q8IU68 726 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms