RNA–Protein interactions for RNA: ENST00000560402.1

SMAD3-214, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-214ENST00000560402 PIDD1Q9HB75 910 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 FAM86C1Q9NVL1 165 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.94□□□□□ -0.02
SMAD3-214ENST00000560402 KLK14Q9P0G3 267 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 FBXL21Q9UKT6 434 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 ZDHHC9Q9Y397 364 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 TRIP11Q15643 1979 aa14.94□□□□□ -0.02
SMAD3-214ENST00000560402 CITO14578 2027 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 H3BQV1 296 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 TMEM189-UBE2V1I3L0A0 370 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 PTGESO14684 152 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 GFRA3O60609 400 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 RFPL2O75678 378 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 ZMYND10O75800 440 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 KIF4AO95239 1232 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 F13A1P00488 732 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 AOC1P19801 751 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 HOXA9P31269 272 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 KLHL40Q2TBA0 621 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 LIN9Q5TKA1 542 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 FOXD4L5Q5VV16 416 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-214ENST00000560402 FLCNQ8NFG4 579 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 FOXD4L4Q8WXT5 416 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-214ENST00000560402 BSNDQ8WZ55 320 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 TTPALQ9BTX7 342 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 PRKD2Q9BZL6 878 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 NT5C3AQ9H0P0 336 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 SNTG2Q9NY99 539 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 FBXW11Q9UKB1 542 aa14.93□□□□□ -0.02
SMAD3-214ENST00000560402 ZFP37Q9Y6Q3 630 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-214ENST00000560402 MYH15Q9Y2K3 1946 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 CASTOR2A6NHX0 329 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 H0Y858 1186 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 N4BP1O75113 896 aaKnown RBP14.92□□□□□ -0.02
SMAD3-214ENST00000560402 POU2F2P09086 479 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 HNRNPA1P09651 372 aaKnown RBP eCLIP14.92□□□□□ -0.02
SMAD3-214ENST00000560402 CCT6AP40227 531 aaKnown RBP14.92□□□□□ -0.02
SMAD3-214ENST00000560402 NBL1P41271 181 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 ZNF174Q15697 407 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 PSMD5Q16401 504 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 RTP2Q5QGT7 225 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 L1TD1Q5T7N2 865 aaKnown RBP14.92□□□□□ -0.02
SMAD3-214ENST00000560402 PDZRN4Q6ZMN7 1036 aaPredicted RBP14.92□□□□□ -0.02
SMAD3-214ENST00000560402 PALB2Q86YC2 1186 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 SYAP1Q96A49 352 aaPredicted RBP14.92□□□□□ -0.02
SMAD3-214ENST00000560402 B3GALT6Q96L58 329 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 WNT16Q9UBV4 365 aa14.92□□□□□ -0.02
SMAD3-214ENST00000560402 MYH11P35749 1972 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 PDCD11Q14690 1871 aaKnown RBP14.91□□□□□ -0.02
SMAD3-214ENST00000560402 A0A087WWV3 80 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 LAD1O00515 517 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 SRFP11831 508 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 PDIA5Q14554 519 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 NAB2Q15742 525 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 FAM171A1Q5VUB5 890 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 RTL10Q7L3V2 364 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 GET4Q7L5D6 327 aaPredicted RBP14.91□□□□□ -0.02
SMAD3-214ENST00000560402 GLYCTKQ8IVS8 523 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 CCDC105Q8IYK2 499 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 SIX5Q8N196 739 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 UROC1Q96N76 676 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 MYADMQ96S97 322 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 PAAF1Q9BRP4 392 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 BHMT2Q9H2M3 363 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 LRWD1Q9UFC0 647 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 MYO15AQ9UKN7 3530 aa14.91□□□□□ -0.02
SMAD3-214ENST00000560402 TTLL13PA6NNM8 815 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 XYLBO75191 536 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 EDN1P05305 212 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 SPATA31D3P0C874 917 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 U2AF2P26368 475 aaKnown RBP eCLIP14.9□□□□□ -0.02
SMAD3-214ENST00000560402 ATF7IP2Q5U623 682 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 PRSS55Q6UWB4 352 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-214ENST00000560402 SPATA31D4Q6ZUB0 917 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 IGSF22Q8N9C0 903 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 LNX1Q8TBB1 728 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-214ENST00000560402 SNX29Q8TEQ0 813 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 HASPINQ8TF76 798 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 ZSCAN16Q9H4T2 348 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-214ENST00000560402 TOPORSQ9NS56 1045 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-214ENST00000560402 MTMR6Q9Y217 621 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 TNFSF13BQ9Y275 285 aa14.9□□□□□ -0.02
SMAD3-214ENST00000560402 ANHXE9PGG2 379 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 PRPF40AO75400 957 aaKnown RBP14.89□□□□□ -0.03
SMAD3-214ENST00000560402 C8AP07357 584 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 LAMP2P13473 410 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 NPR3P17342 541 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 RPL17P18621 184 aaKnown RBP14.89□□□□□ -0.03
SMAD3-214ENST00000560402 LIG1P18858 919 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 RFX1P22670 979 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 PRPHP41219 470 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 KRT85P78386 507 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 DMP1Q13316 513 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-214ENST00000560402 PPM1LQ5SGD2 360 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 EEF1DP3Q658K8 133 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 CEP57Q86XR8 500 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 SLC44A3Q8N4M1 653 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 RABGGTAQ92696 567 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 DRC1Q96MC2 740 aa14.89□□□□□ -0.03
SMAD3-214ENST00000560402 PPP1R10Q96QC0 940 aaKnown RBP14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms