RNA–Protein interactions for RNA: ENST00000560307.5

SNRPA1-209, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 433 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-209ENST00000560307 LMNAP02545 664 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CSF1RP07333 972 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 LINGO3P0C6S8 592 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 PHKG2P15735 406 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 ATP2A2P16615 1042 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CASP1P29466 404 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 MATR3P43243 847 aaKnown RBP eCLIP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 PAPOLAP51003 745 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 PDE6CP51160 858 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 USP11P51784 963 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 GUCY2FP51841 1108 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 MAGOHP61326 146 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 NCALDP61601 193 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 GPLD1P80108 840 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 AMPD3Q01432 767 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CYP27A1Q02318 531 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC63Q05C16 580 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 TCIRG1Q13488 830 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 MPP2Q14168 576 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 HLTFQ14527 1009 aaKnown RBP eCLIP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 PDIA5Q14554 519 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 RASA3Q14644 834 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 NPY5RQ15761 445 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 PARP6Q2NL67 630 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 KRT71Q3SY84 523 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 ODF2Q5BJF6 829 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 RRP12Q5JTH9 1297 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CENPPQ6IPU0 288 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 GALNT17Q6IS24 598 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 C2CD5Q86YS7 1000 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CELF2-AS1Q8N7Q2 184 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 FAM169BQ8N8A8 192 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 C4orf32Q8N8J7 132 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 MAGOHBQ96A72 148 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 MTMR8Q96EF0 704 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 TSC22D3Q99576 134 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 ISCA1Q9BUE6 129 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 TRIM7Q9C029 511 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 BLZF1Q9H2G9 400 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CLEC4MQ9H2X3 399 aaPredicted RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 EPB41L4AQ9HCS5 686 aaPredicted RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 ARHGEF3Q9NR81 526 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 NDFIP2Q9NV92 336 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CNOT8Q9UFF9 292 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 CNOT7Q9UIV1 285 aaKnown RBP6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 FBXL5Q9UKA1 691 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 INTUQ9ULD6 942 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 RNF112Q9ULX5 631 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 TFR2Q9UP52 801 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 LRRC42Q9Y546 428 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 KCPQ6ZWJ8 1503 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 COL18A1P39060 1754 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 ZNF532Q9HCE3 1301 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 NHSL1Q5SYE7 1610 aa6.43□□□□□ -1.38
SNRPA1-209ENST00000560307 MYH4Q9Y623 1939 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 TNS3Q68CZ2 1445 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 KIAA1551Q9HCM1 1747 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 COL1A1P02452 1464 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 MAST2Q6P0Q8 1798 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 GPR75-ASB3A0A0A6YYF3 556 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 PVALEFA0A1B0GWK0 134 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 EME2A4GXA9 379 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 MPHOSPH10O00566 681 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 NCK2O43639 380 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 SNX3O60493 162 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 CTNND1O60716 968 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 PALMO75781 387 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 SUN1O94901 812 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 GJB6O95452 261 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 PCCAP05165 728 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 MMEP08473 750 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 GSTA2P09210 222 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 HOXD8P13378 290 aaPredicted RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 CPB1P15086 417 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ACADSP16219 412 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ATP6V1C1P21283 382 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ATP5DP30049 168 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ADORA1P30542 326 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ALDH3A1P30838 453 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 MCAMP43121 646 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 PMS1P54277 932 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 DRG2P55039 364 aaKnown RBP6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 NPEPPSP55786 919 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 PCDH1Q08174 1060 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 BNIP1Q12981 228 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ACVR2BQ13705 512 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 RPS6KA1Q15418 735 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ZNF174Q15697 407 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 SLC18A3Q16572 532 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 TNFAIP8L3Q5GJ75 292 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ANKRD20A2Q5SQ80 823 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ANKRD20A1Q5TYW2 823 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 RASIP1Q5U651 963 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ANKRD20A3Q5VUR7 823 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 HGSNATQ68CP4 663 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 LLGL2Q6P1M3 1020 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 TMTC3Q6ZXV5 915 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 ASRGL1Q7L266 308 aa6.42□□□□□ -1.38
SNRPA1-209ENST00000560307 TAOK1Q7L7X3 1001 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms