RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 CTNNA1P35221 906 aaKnown RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 USP8P40818 1118 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 PEX5P50542 639 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 AP3M2P53677 418 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 HNRNPH2P55795 449 aaKnown RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 RNASE9P60153 205 aaKnown RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 MRPS25P82663 173 aaKnown RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 GRM1Q13255 1194 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 BIRC3Q13489 604 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 SURF1Q15526 300 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 TARBP2Q15633 366 aaKnown RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 CYP1B1Q16678 543 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 WDR44Q5JSH3 913 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 AGBL2Q5U5Z8 902 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 DUPD1Q68J44 220 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 ZPBP2Q6X784 338 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 KDM7AQ6ZMT4 941 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 ANKRD35Q8N283 1001 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 C12orf50Q8NA57 414 aaPredicted RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 DEPTORQ8TB45 409 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 ZNF564Q8TBZ8 553 aaPredicted RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 SLC7A3Q8WY07 619 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 RIN2Q8WYP3 895 aaPredicted RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 PIK3R5Q8WYR1 880 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 ALG3Q92685 438 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 CCDC127Q96BQ5 260 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 ZNF653Q96CK0 615 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 ATP6V1G3Q96LB4 118 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 FNBP1Q96RU3 617 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 CEP89Q96ST8 783 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 KIFC3Q9BVG8 833 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 AP1M1Q9BXS5 423 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 PARP2Q9UGN5 583 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 PCYOX1Q9UHG3 505 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 AGO2Q9UKV8 859 aaKnown RBP8.68□□□□□ -1.02
SMAD3-212ENST00000559937 CNTN6Q9UQ52 1028 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 PCDHB2Q9Y5E7 798 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 PCDHA3Q9Y5H8 950 aa8.68□□□□□ -1.02
SMAD3-212ENST00000559937 A0A0B4J269 797 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 GSTTP1A0A1W2PQM5 241 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 GOLGA6L10A6NI86 522 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 K7ERI5 159 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 PODXLO00592 558 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 CXCL11O14625 94 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 TTI1O43156 1089 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 MGAMO43451 1857 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 MCM3APO60318 1980 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 MAFO75444 373 aaPredicted RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 HLA-DRAP01903 254 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 C4BPAP04003 597 aaKnown RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 ATP4AP20648 1035 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 UBA1P22314 1058 aaKnown RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 GLRA2P23416 452 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 SLC1A1P43005 524 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 FNTAP49354 379 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 GUCY2FP51841 1108 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 EFNA5P52803 228 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 HIRAP54198 1017 aaPredicted RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 EIF3BP55884 814 aaKnown RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 DR1Q01658 176 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 SP2Q02086 613 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 PTP4A2Q12974 167 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 MESDQ14696 234 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 TTMPQ5BVD1 217 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 IER5Q5VY09 327 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 LRRC31Q6UY01 552 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 CYFIP1Q7L576 1253 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 TMC3Q7Z5M5 1100 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 CROCCP2Q86T23 111 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 SLC47A2Q86VL8 602 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 ARFGAP2Q8N6H7 521 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 TCP11Q8WWU5 503 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 ZNF516Q92618 1163 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 ARL8AQ96BM9 186 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 VCPIP1Q96JH7 1222 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 JPH2Q9BR39 696 aaPredicted RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 FAM213AQ9BRX8 229 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 ERP44Q9BS26 406 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 NUP85Q9BW27 656 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 CAPS2Q9BXY5 557 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 TOPORSQ9NS56 1045 aaPredicted RBP8.67□□□□□ -1.02
SMAD3-212ENST00000559937 AMACRQ9UHK6 382 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 LCMT1Q9UIC8 334 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 MTUS1Q9ULD2 1270 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 PLAAQ9Y263 795 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 CSADQ9Y600 493 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 PCNTO95613 3336 aa8.67□□□□□ -1.02
SMAD3-212ENST00000559937 PLXNB2O15031 1838 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 ADGRA2Q96PE1 1338 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 A0A0G2JLL6 359 aaPredicted RBP8.66□□□□□ -1.02
SMAD3-212ENST00000559937 SOWAHBA6NEL2 793 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 LRRIQ4A6NIV6 560 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 DAPK3O43293 454 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 SPOPO43791 374 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 ADCY3O60266 1144 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 ZEB2O60315 1214 aa8.66□□□□□ -1.02
SMAD3-212ENST00000559937 PPFIA2O75334 1257 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms