RNA–Protein interactions for RNA: ENST00000559822.1

SPG11-219, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-219ENST00000559822 TMEM134Q9H6X4 195 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 KMT5AQ9NQR1 393 aa13.48□□□□□ -0.25
SPG11-219ENST00000559822 E9PMD0 336 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 TMEM189-UBE2V1I3L0A0 370 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 TRAPPC3O43617 180 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 HIP1RO75146 1068 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 EDN1P05305 212 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 SPATA31D3P0C874 917 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 ATP2C1P98194 919 aaPredicted RBP13.47□□□□□ -0.25
SPG11-219ENST00000559822 NAB2Q15742 525 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 NT5DC1Q5TFE4 455 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 LILRA6Q6PI73 481 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 DCLRE1AQ6PJP8 1040 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 PRSS55Q6UWB4 352 aaPredicted RBP13.47□□□□□ -0.25
SPG11-219ENST00000559822 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.47□□□□□ -0.25
SPG11-219ENST00000559822 SPATA31D4Q6ZUB0 917 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 CEP57Q86XR8 500 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 GLYCTKQ8IVS8 523 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 TMX3Q96JJ7 454 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 KCNK12Q9HB15 430 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 SLC38A7Q9NVC3 462 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.47□□□□□ -0.25
SPG11-219ENST00000559822 KCND2Q9NZV8 630 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 ARHGAP28Q9P2N2 729 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 EPS15L1Q9UBC2 864 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 CACNG4Q9UBN1 327 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 FBXW11Q9UKB1 542 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 DUSP12Q9UNI6 340 aa13.47□□□□□ -0.25
SPG11-219ENST00000559822 MTCL1Q9Y4B5 1905 aaKnown RBP13.47□□□□□ -0.25
SPG11-219ENST00000559822 PP2D1A8MPX8 630 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 ZMYND10O75800 440 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 B3GAT3O94766 335 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 PDGFBP01127 241 aaPredicted RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 HNRNPA1P09651 372 aaKnown RBP eCLIP13.46□□□□□ -0.25
SPG11-219ENST00000559822 MYBP10242 640 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 RPL17P18621 184 aaKnown RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 GUCY2CP25092 1073 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 GRM5P41594 1212 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 SMTNP53814 917 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 TCF15Q12870 199 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 ZRSR1Q15695 479 aaKnown RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 ARL6IP4Q66PJ3 421 aaKnown RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 ASTLQ6HA08 431 aaPredicted RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 RINT1Q6NUQ1 792 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 LNX1Q8TBB1 728 aaPredicted RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 ZNF707Q96C28 371 aaPredicted RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 DDX27Q96GQ7 796 aaKnown RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 PPP1R10Q96QC0 940 aaKnown RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 ACO2Q99798 780 aaKnown RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 TCHPQ9BT92 498 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 RUSC1Q9BVN2 902 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 POLD4Q9HCU8 107 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 FBXL21Q9UKT6 434 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 USP20Q9Y2K6 914 aa13.46□□□□□ -0.25
SPG11-219ENST00000559822 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 ZFP37Q9Y6Q3 630 aaPredicted RBP13.46□□□□□ -0.25
SPG11-219ENST00000559822 H0YCG3 227 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 SLC26A4O43511 780 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 GALR2O43603 387 aaPredicted RBP13.45□□□□□ -0.26
SPG11-219ENST00000559822 XYLBO75191 536 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 MCF2P10911 925 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 GJB2P29033 226 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 HOXA9P31269 272 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 CLCN5P51795 746 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 STRN3Q13033 797 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 IL17AQ16552 155 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 GLRA4Q5JXX5 417 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 HYIQ5T013 277 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 MPZL3Q6UWV2 235 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 C1orf186Q6ZWK4 172 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 RTL10Q7L3V2 364 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 DAW1Q8N136 415 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 FEZF2Q8TBJ5 459 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 SPIRE2Q8WWL2 714 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 CLSTN3Q9BQT9 956 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 NTPCRQ9BSD7 190 aaKnown RBP13.45□□□□□ -0.26
SPG11-219ENST00000559822 CDT1Q9H211 546 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 SMOC2Q9H3U7 446 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 SMC3Q9UQE7 1217 aa13.45□□□□□ -0.26
SPG11-219ENST00000559822 SMIM28A0A1B0GU29 152 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 VWA3AA6NCI4 1184 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 N4BP1O75113 896 aaKnown RBP13.44□□□□□ -0.26
SPG11-219ENST00000559822 BMP15O95972 392 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 C8AP07357 584 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 PLS3P13797 630 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 SCP2P22307 547 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 FGFR3P22607 806 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 FSHRP23945 695 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 CDC25AP30304 524 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 RAB33AQ14088 237 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 UPP1Q16831 310 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 UVSSAQ2YD98 709 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 XKR4Q5GH76 650 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 PPM1LQ5SGD2 360 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 ANKS3Q6ZW76 656 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 GET4Q7L5D6 327 aaPredicted RBP13.44□□□□□ -0.26
SPG11-219ENST00000559822 SYT2Q8N9I0 419 aaPredicted RBP13.44□□□□□ -0.26
SPG11-219ENST00000559822 ATOH1Q92858 354 aaPredicted RBP13.44□□□□□ -0.26
SPG11-219ENST00000559822 AK8Q96MA6 479 aa13.44□□□□□ -0.26
SPG11-219ENST00000559822 ACAP3Q96P50 834 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms