RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 FSCN1Q16658 493 aaKnown RBP13.69□□□□□ -0.22
USP3-213ENST00000559711 DEFB115Q30KQ5 88 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 SEZ6Q53EL9 994 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 MFSD14CQ5VZR4 134 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 EEF1DP3Q658K8 133 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 LMBRD2Q68DH5 695 aaPredicted RBP13.69□□□□□ -0.22
USP3-213ENST00000559711 SRGAP1Q7Z6B7 1085 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 WDR49Q8IV35 697 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 TRIM58Q8NG06 486 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 TATDN2Q93075 761 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 CDT1Q9H211 546 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 INTUQ9ULD6 942 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 GABRQQ9UN88 632 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 SMIM35A0A1B0GVV1 85 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 MACROD2A1Z1Q3 448 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 TULP1O00294 542 aaPredicted RBP13.69□□□□□ -0.22
USP3-213ENST00000559711 TACC1O75410 805 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 MCF2P10911 925 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 FLT3LGP49771 235 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 ZNF568Q3ZCX4 644 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 LNX1Q8TBB1 728 aaPredicted RBP13.69□□□□□ -0.22
USP3-213ENST00000559711 NLRP7Q8WX94 980 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 TRIB2Q92519 343 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 ERO1AQ96HE7 468 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 FAM84AQ96KN4 292 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 CAPNS2Q96L46 248 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 KATNAL1Q9BW62 490 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 CFHR5Q9BXR6 569 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 ADAMTS10Q9H324 1103 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 SALL4Q9UJQ4 1053 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 CDC23Q9UJX2 597 aa13.69□□□□□ -0.22
USP3-213ENST00000559711 ANO9A1A5B4 782 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 GPR25O00155 361 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 B4GALT4O60513 344 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 KPNA6O60684 536 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 MYL3P08590 195 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 HOXC8P31273 242 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 GJA9P57773 515 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 NKX3-2P78367 333 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 BEX3Q00994 111 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 AMPD2Q01433 879 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 BIRC3Q13489 604 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 TMEM132AQ24JP5 1023 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 WDR44Q5JSH3 913 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 PAPD7Q5XG87 772 aaKnown RBP13.68□□□□□ -0.22
USP3-213ENST00000559711 GLYCTKQ8IVS8 523 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 AGPAT1Q99943 283 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 PI4K2AQ9BTU6 479 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 PACSIN1Q9BY11 444 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 PDZD7Q9H5P4 517 aa13.68□□□□□ -0.22
USP3-213ENST00000559711 GPR32O75388 356 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 CSDE1O75534 798 aaKnown RBP13.67□□□□□ -0.22
USP3-213ENST00000559711 MOCS3O95396 460 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 TBC1D8O95759 1140 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 ARF4P18085 180 aaPredicted RBP13.67□□□□□ -0.22
USP3-213ENST00000559711 TNFAIP3P21580 790 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 PIK3CAP42336 1068 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 PURAQ00577 322 aaKnown RBP13.67□□□□□ -0.22
USP3-213ENST00000559711 PRKCZQ05513 592 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 HIC1Q14526 733 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 KYAT1Q16773 422 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 DUOXA2Q1HG44 320 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 THNSL1Q8IYQ7 743 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 NOX5Q96PH1 765 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 PPP1R16BQ96T49 567 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 UPF3AQ9H1J1 476 aaKnown RBP13.67□□□□□ -0.22
USP3-213ENST00000559711 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.67□□□□□ -0.222e-22■■■■■ 279.5
USP3-213ENST00000559711 CREBZFQ9NS37 354 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 C1orf112Q9NSG2 853 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 JRKLQ9Y4A0 524 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 CAPN6Q9Y6Q1 641 aa13.67□□□□□ -0.22
USP3-213ENST00000559711 A0A1B0GUA9 196 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 TSPAN1O60635 241 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 IL18RAPO95256 599 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 CLTAP09496 248 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 H2AFZP0C0S5 128 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 CYP2C9P11712 490 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 SP3Q02447 781 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 NCOA4Q13772 614 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 PCBP1Q15365 356 aaKnown RBP eCLIP13.66□□□□□ -0.22
USP3-213ENST00000559711 SMYD5Q6GMV2 418 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 H2AFVQ71UI9 128 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 TRAPPC11Q7Z392 1133 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 CDR2LQ86X02 465 aaPredicted RBP13.66□□□□□ -0.22
USP3-213ENST00000559711 CEP120Q8N960 986 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 U2AF1L4Q8WU68 220 aaKnown RBP13.66□□□□□ -0.22
USP3-213ENST00000559711 ALS2CR12Q96Q35 445 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 GCOM2Q9BZD3 368 aaPredicted RBP13.66□□□□□ -0.22
USP3-213ENST00000559711 APOBEC3GQ9HC16 384 aaKnown RBP13.66□□□□□ -0.22
USP3-213ENST00000559711 NOCTQ9UK39 431 aaKnown RBP13.66□□□□□ -0.22
USP3-213ENST00000559711 A0A0A6YYK5 440 aaPredicted RBP13.66□□□□□ -0.22
USP3-213ENST00000559711 CYP26A1O43174 497 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 SEPT4O43236 478 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 SGPL1O95470 568 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 ATP1A1P05023 1023 aaKnown RBP13.66□□□□□ -0.22
USP3-213ENST00000559711 STAG3L1P0CL83 205 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 CAP1Q01518 475 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 KIZQ2M2Z5 673 aa13.66□□□□□ -0.22
USP3-213ENST00000559711 RUFY4Q6ZNE9 571 aa13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 101.5 ms