RNA–Protein interactions for RNA: ENST00000559399.5

LRRC28-213, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-213ENST00000559399 FAM86C1Q9NVL1 165 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 TNFSF13BQ9Y275 285 aa16.43■□□□□ 0.22
LRRC28-213ENST00000559399 CCDC169A6NNP5 214 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 E9PMD0 336 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 ST18O60284 1047 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 ZMYND10O75800 440 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 CENPBP07199 599 aaPredicted RBP16.42■□□□□ 0.22
LRRC28-213ENST00000559399 NPTX2P47972 431 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 CLCN5P51795 746 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 PEX3P56589 373 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.42■□□□□ 0.22
LRRC28-213ENST00000559399 GET4Q7L5D6 327 aaPredicted RBP16.42■□□□□ 0.22
LRRC28-213ENST00000559399 LNX1Q8TBB1 728 aaPredicted RBP16.42■□□□□ 0.22
LRRC28-213ENST00000559399 DRC1Q96MC2 740 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 MYADMQ96S97 322 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 RUSC1Q9BVN2 902 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.42■□□□□ 0.22
LRRC28-213ENST00000559399 FBXW11Q9UKB1 542 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 FBXL21Q9UKT6 434 aa16.42■□□□□ 0.22
LRRC28-213ENST00000559399 H0Y858 1186 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 TMEM189-UBE2V1I3L0A0 370 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 HIP1RO75146 1068 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 B3GAT3O94766 335 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 YARSP54577 528 aaKnown RBP16.41■□□□□ 0.22
LRRC28-213ENST00000559399 IL17AQ16552 155 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 ZNF568Q3ZCX4 644 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 RILPL1Q5EBL4 403 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 CWF19L1Q69YN2 538 aaKnown RBP16.41■□□□□ 0.22
LRRC28-213ENST00000559399 MCTP1Q6DN14 999 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 DAW1Q8N136 415 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 FLCNQ8NFG4 579 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 NXPE3Q969Y0 559 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 UROC1Q96N76 676 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 PPP1R10Q96QC0 940 aaKnown RBP16.41■□□□□ 0.22
LRRC28-213ENST00000559399 CLSTN3Q9BQT9 956 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 CCDC94Q9BW85 323 aaPredicted RBP16.41■□□□□ 0.22
LRRC28-213ENST00000559399 MRPL4Q9BYD3 311 aaKnown RBP16.41■□□□□ 0.22
LRRC28-213ENST00000559399 CDT1Q9H211 546 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.41■□□□□ 0.22
LRRC28-213ENST00000559399 TOPORSQ9NS56 1045 aaPredicted RBP16.41■□□□□ 0.22
LRRC28-213ENST00000559399 ARHGAP28Q9P2N2 729 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 ZDBF2Q9HCK1 2354 aa16.41■□□□□ 0.22
LRRC28-213ENST00000559399 C8AP07357 584 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 HNRNPA1P09651 372 aaKnown RBP eCLIP16.4■□□□□ 0.22
LRRC28-213ENST00000559399 CDC25AP30304 524 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 GRM5P41594 1212 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 CLCNKBP51801 687 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 RINT1Q6NUQ1 792 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 DCLRE1AQ6PJP8 1040 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 SIX5Q8N196 739 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 RSAD2Q8WXG1 361 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 ACO2Q99798 780 aaKnown RBP16.4■□□□□ 0.22
LRRC28-213ENST00000559399 MMTAG2Q9BU76 263 aaKnown RBP16.4■□□□□ 0.22
LRRC28-213ENST00000559399 TIPINQ9BVW5 301 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 TMEM134Q9H6X4 195 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 C17orf75Q9HAS0 396 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 KMT5AQ9NQR1 393 aa16.4■□□□□ 0.22
LRRC28-213ENST00000559399 RBM19Q9Y4C8 960 aaKnown RBP16.4■□□□□ 0.22
LRRC28-213ENST00000559399 ADAM12O43184 909 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 NARSO43776 548 aaKnown RBP16.39■□□□□ 0.21
LRRC28-213ENST00000559399 LAMP2P13473 410 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 FGFR3P22607 806 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 FSHRP23945 695 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 HOXA9P31269 272 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 ATP2C1P98194 919 aaPredicted RBP16.39■□□□□ 0.21
LRRC28-213ENST00000559399 MAPK7Q13164 816 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 ZRSR1Q15695 479 aaKnown RBP16.39■□□□□ 0.21
LRRC28-213ENST00000559399 UPP1Q16831 310 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 PPM1LQ5SGD2 360 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 C1orf186Q6ZWK4 172 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 KCNK18Q7Z418 384 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 CEP120Q8N960 986 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 TARS2Q9BW92 718 aaKnown RBP16.39■□□□□ 0.21
LRRC28-213ENST00000559399 PTPRHQ9HD43 1115 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 SLC38A7Q9NVC3 462 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 MTRRQ9UBK8 725 aa16.39■□□□□ 0.21
LRRC28-213ENST00000559399 DENND4AQ7Z401 1863 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 KMT2EQ8IZD2 1858 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 SMIM28A0A1B0GU29 152 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 TRAPPC3O43617 180 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 GFRA3O60609 400 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 CFHP08603 1231 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 MCF2P10911 925 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 SRFP11831 508 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 NPR3P17342 541 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 AOC1P19801 751 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 GUCY2CP25092 1073 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 OSTNP61366 133 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 RAB33AQ14088 237 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 XKR4Q5GH76 650 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 TAS1R3Q7RTX0 852 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 GRASPQ7Z6J2 395 aaPredicted RBP16.38■□□□□ 0.21
LRRC28-213ENST00000559399 SLC44A3Q8N4M1 653 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 SLC7A14Q8TBB6 771 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 TMX3Q96JJ7 454 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 SNX27Q96L92 541 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 TCHPQ9BT92 498 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 GOLGA2P5Q9HBQ8 144 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 WNT16Q9UBV4 365 aa16.38■□□□□ 0.21
LRRC28-213ENST00000559399 ZFP37Q9Y6Q3 630 aaPredicted RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms