RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 TMEM161BQ8NDZ6 487 aa18.68■□□□□ 0.58
LRRC28-210ENST00000558879 INTS4Q96HW7 963 aaKnown RBP18.68■□□□□ 0.58
LRRC28-210ENST00000558879 CDK5RAP3Q96JB5 506 aa18.68■□□□□ 0.58
LRRC28-210ENST00000558879 PLIN2Q99541 437 aa18.68■□□□□ 0.58
LRRC28-210ENST00000558879 TARS2Q9BW92 718 aaKnown RBP18.68■□□□□ 0.58
LRRC28-210ENST00000558879 RHOBTB2Q9BYZ6 727 aa18.68■□□□□ 0.58
LRRC28-210ENST00000558879 SFI1A8K8P3 1242 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 GLUD1P00367 558 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 MCF2P10911 925 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 NCKAP1LP55160 1127 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 CREMQ03060 361 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 RAD51AP2Q09MP3 1159 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 PTPAQ15257 358 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 GLRA4Q5JXX5 417 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 ATAT1Q5SQI0 421 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 ALKAL1Q6UXT8 129 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 TMC5Q6UXY8 1006 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 HFE2Q6ZVN8 426 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 HASPINQ8TF76 798 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 PIK3R5Q8WYR1 880 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 SNX27Q96L92 541 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 ODF2LQ9ULJ1 636 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 USTQ9Y2C2 406 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 ZDBF2Q9HCK1 2354 aa18.67■□□□□ 0.58
LRRC28-210ENST00000558879 TADA2AO75478 443 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 MAPTP10636 758 aaKnown RBP18.66■□□□□ 0.58
LRRC28-210ENST00000558879 SYT1P21579 422 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 MPZL3Q6UWV2 235 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 TRIM67Q6ZTA4 783 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 BMP8AQ7Z5Y6 402 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 HDAC7Q8WUI4 952 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 RIN2Q8WYP3 895 aaPredicted RBP18.66■□□□□ 0.58
LRRC28-210ENST00000558879 CALML4Q96GE6 196 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 CCDC94Q9BW85 323 aaPredicted RBP18.66■□□□□ 0.58
LRRC28-210ENST00000558879 TOPORSQ9NS56 1045 aaPredicted RBP18.66■□□□□ 0.58
LRRC28-210ENST00000558879 KCNG1Q9UIX4 513 aa18.66■□□□□ 0.58
LRRC28-210ENST00000558879 NPHP3-ACAD11A0A0J9YXS1 232 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 MEFVO15553 781 aaPredicted RBP18.65■□□□□ 0.58
LRRC28-210ENST00000558879 PLCG1P19174 1290 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 PLA2G5P39877 138 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 UBA7P41226 1012 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 ZNF131P52739 623 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 CACNB1Q02641 598 aaPredicted RBP18.65■□□□□ 0.58
LRRC28-210ENST00000558879 SIGLEC14Q08ET2 396 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 ELAVL2Q12926 359 aaKnown RBP18.65■□□□□ 0.58
LRRC28-210ENST00000558879 LILRA6Q6PI73 481 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 CD300LGQ6UXG3 332 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 CCDC149Q6ZUS6 474 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 ZDHHC14Q8IZN3 488 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 TDRD5Q8NAT2 981 aaKnown RBP18.65■□□□□ 0.58
LRRC28-210ENST00000558879 ASIC4Q96FT7 647 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 UROC1Q96N76 676 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 REEP2Q9BRK0 252 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 CCSER1Q9C0I3 900 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 TSHZ2Q9NRE2 1034 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 CNTN3Q9P232 1028 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 LARSQ9P2J5 1176 aaKnown RBP18.65■□□□□ 0.58
LRRC28-210ENST00000558879 DPP7Q9UHL4 492 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 CLIC4Q9Y696 253 aa18.65■□□□□ 0.58
LRRC28-210ENST00000558879 MORC2Q9Y6X9 1032 aaPredicted RBP18.65■□□□□ 0.58
LRRC28-210ENST00000558879 SMIM28A0A1B0GU29 152 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 K7ELQ4 463 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-210ENST00000558879 TGM5O43548 720 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 TOM1L1O75674 476 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 SMTNP53814 917 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 SOX4Q06945 474 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-210ENST00000558879 STRN3Q13033 797 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 NOLC1Q14978 699 aaKnown RBP eCLIP18.64■□□□□ 0.57
LRRC28-210ENST00000558879 KARSQ15046 597 aaKnown RBP18.64■□□□□ 0.57
LRRC28-210ENST00000558879 UPP1Q16831 310 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 PRSS55Q6UWB4 352 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-210ENST00000558879 CYP26C1Q6V0L0 522 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 ZPBP2Q6X784 338 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-210ENST00000558879 GPBP1Q86WP2 473 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 C3orf58Q8NDZ4 430 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 LNX1Q8TBB1 728 aaPredicted RBP18.64■□□□□ 0.57
LRRC28-210ENST00000558879 RAD54LQ92698 747 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 TTPALQ9BTX7 342 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 GOLGA2P5Q9HBQ8 144 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 SCN1AP35498 2009 aa18.64■□□□□ 0.57
LRRC28-210ENST00000558879 TMEM221A6NGB7 291 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 SPDYE4A6NLX3 237 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 M0R296 226 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 KCNE1P15382 129 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 RPL17P18621 184 aaKnown RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 IGFBP6P24592 240 aaPredicted RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 CLCNKBP51801 687 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 YARSP54577 528 aaKnown RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 MCL1Q07820 350 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 PSMD5Q16401 504 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 FAM171A1Q5VUB5 890 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 ELMSAN1Q6PJG2 1045 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 ZBTB33Q86T24 672 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 LARP4BQ92615 738 aaKnown RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 ZNF707Q96C28 371 aaPredicted RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 ZBTB45Q96K62 511 aaPredicted RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 ZMAT2Q96NC0 199 aaKnown RBP18.63■□□□□ 0.57
LRRC28-210ENST00000558879 FIZ1Q96SL8 496 aa18.63■□□□□ 0.57
LRRC28-210ENST00000558879 CLSTN3Q9BQT9 956 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms