RNA–Protein interactions for RNA: ENST00000558575.1

LINC01220-201, Transcript of long intergenic non-protein coding RNA 1220, humanhuman

TSL 1 (best) BASIC

Gene LINC01220, Length 715 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01220-201ENST00000558575 PLAGL2Q9UPG8 496 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 RWDD3Q9Y3V2 267 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 PCDHB7Q9Y5E2 793 aa17.02■□□□□ 0.32
LINC01220-201ENST00000558575 CHD6Q8TD26 2715 aa17.02■□□□□ 0.31
LINC01220-201ENST00000558575 MAP1BP46821 2468 aaKnown RBP17.02■□□□□ 0.31
LINC01220-201ENST00000558575 EOMESO95936 686 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 FGFR1P11362 822 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 NCBP1Q09161 790 aaKnown RBP17.01■□□□□ 0.31
LINC01220-201ENST00000558575 KCNA1Q09470 495 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 DPYDQ12882 1025 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 UNC13DQ70J99 1090 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 CCDC65Q8IXS2 484 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 CCDC51Q96ER9 411 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 LMBRD1Q9NUN5 540 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 TNFSF13BQ9Y275 285 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 HES2Q9Y543 173 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 PCDHGC5Q9Y5F6 944 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 SPTBN2O15020 2390 aa17.01■□□□□ 0.31
LINC01220-201ENST00000558575 PVALEFA0A1B0GWK0 134 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 K7ENM7 598 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 NPTXRO95502 500 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 STAG3L1P0CL83 205 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 MYBP10242 640 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 PROZP22891 400 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 NRIP1P48552 1158 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 UBE2HP62256 183 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 RBM10P98175 930 aaKnown RBP17■□□□□ 0.31
LINC01220-201ENST00000558575 CLLU1OSQ5K130 101 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 ATF7IP2Q5U623 682 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 SLC39A4Q6P5W5 647 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 SLC27A1Q6PCB7 646 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 AGMOQ6ZNB7 445 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 RBM23Q86U06 439 aaKnown RBP17■□□□□ 0.31
LINC01220-201ENST00000558575 TIGD1Q96MW7 591 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 CASD1Q96PB1 797 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 MRPL4Q9BYD3 311 aaKnown RBP17■□□□□ 0.31
LINC01220-201ENST00000558575 HAPLN2Q9GZV7 340 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 MRPL44Q9H9J2 332 aaKnown RBP17■□□□□ 0.31
LINC01220-201ENST00000558575 LRFN2Q9ULH4 789 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 IPPQ9Y573 584 aa17■□□□□ 0.31
LINC01220-201ENST00000558575 FRYLO94915 3013 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 ANKRD63C9JTQ0 380 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 H0YCG3 227 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 ITGB1P05556 798 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 HOXD13P35453 343 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 RAB27AP51159 221 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 AFF1P51825 1210 aaKnown RBP16.99■□□□□ 0.31
LINC01220-201ENST00000558575 ZPBP2Q6X784 338 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 MAP4K3Q8IVH8 894 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 RNF169Q8NCN4 708 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 SPPL3Q8TCT6 385 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 SUSD6Q92537 303 aa16.99■□□□□ 0.31
LINC01220-201ENST00000558575 NKD2Q969F2 451 aaPredicted RBP16.99■□□□□ 0.31
LINC01220-201ENST00000558575 NXF3Q9H4D5 531 aaKnown RBP16.99■□□□□ 0.31
LINC01220-201ENST00000558575 MYH11P35749 1972 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 OTOGLQ3ZCN5 2332 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 FANCMQ8IYD8 2048 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 TISP43B9A030 160 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 N4BP3O15049 544 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 OFD1O75665 1012 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 PRPF6O94906 941 aaKnown RBP16.98■□□□□ 0.31
LINC01220-201ENST00000558575 PIGRP01833 764 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 SKIP12755 728 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 SCP2P22307 547 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 STRN3Q13033 797 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 PNOCQ13519 176 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 BTG3Q14201 252 aaPredicted RBP16.98■□□□□ 0.31
LINC01220-201ENST00000558575 KMT5BQ4FZB7 885 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 LRRC55Q6ZSA7 311 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 EPM2AIP1Q7L775 607 aaPredicted RBP16.98■□□□□ 0.31
LINC01220-201ENST00000558575 VN1R2Q8NFZ6 395 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 P2RX5Q93086 422 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 PLVAPQ9BX97 442 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 CDT1Q9H211 546 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 CXCL16Q9H2A7 254 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 HCSTQ9UBK5 93 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 BAHCC1Q9P281 2608 aa16.98■□□□□ 0.31
LINC01220-201ENST00000558575 GCNT3O95395 438 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 RPN1P04843 607 aaKnown RBP16.97■□□□□ 0.31
LINC01220-201ENST00000558575 MYL1P05976 194 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 STK4Q13043 487 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 PAN2Q504Q3 1202 aaKnown RBP16.97■□□□□ 0.31
LINC01220-201ENST00000558575 FAM26FQ5R3K3 315 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 L1TD1Q5T7N2 865 aaKnown RBP16.97■□□□□ 0.31
LINC01220-201ENST00000558575 KANK3Q6NY19 840 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 ZBTB33Q86T24 672 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 CEP120Q8N960 986 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 ZNF507Q8TCN5 953 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 HELQQ8TDG4 1101 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 ERCC4Q92889 916 aaPredicted RBP16.97■□□□□ 0.31
LINC01220-201ENST00000558575 PPP2R3CQ969Q6 453 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 RMDN1Q96DB5 314 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 TMEM117Q9H0C3 514 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 MIOSQ9NXC5 875 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 PCDHB13Q9Y5F0 798 aa16.97■□□□□ 0.31
LINC01220-201ENST00000558575 MRPL42Q9Y6G3 142 aaKnown RBP16.97■□□□□ 0.31
LINC01220-201ENST00000558575 TBKBP1A7MCY6 615 aa16.96■□□□□ 0.31
LINC01220-201ENST00000558575 MEFVO15553 781 aaPredicted RBP16.96■□□□□ 0.31
LINC01220-201ENST00000558575 TOM1L1O75674 476 aa16.96■□□□□ 0.31
LINC01220-201ENST00000558575 ITGA4P13612 1032 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms