RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 FNIP2Q9P278 1114 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 KIF3AQ9Y496 699 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 STK24Q9Y6E0 443 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 C2orf16Q68DN1 1984 aa17.09■□□□□ 0.33
TPM1-211ENST00000558314 KMT2EQ8IZD2 1858 aa17.08■□□□□ 0.33
TPM1-211ENST00000558314 SFI1A8K8P3 1242 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 H3BQV1 296 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 ST18O60284 1047 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 B3GAT3O94766 335 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 NPTX2P47972 431 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 YARSP54577 528 aaKnown RBP17.08■□□□□ 0.32
TPM1-211ENST00000558314 DMP1Q13316 513 aaPredicted RBP17.08■□□□□ 0.32
TPM1-211ENST00000558314 ASTLQ6HA08 431 aaPredicted RBP17.08■□□□□ 0.32
TPM1-211ENST00000558314 SIX5Q8N196 739 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 CEP120Q8N960 986 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 RUSC1Q9BVN2 902 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 CCDC94Q9BW85 323 aaPredicted RBP17.08■□□□□ 0.32
TPM1-211ENST00000558314 PRKD2Q9BZL6 878 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 WDFY4Q6ZS81 3184 aa17.08■□□□□ 0.32
TPM1-211ENST00000558314 ZMYM2Q9UBW7 1377 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 I3L4J1 428 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 SLC16A4O15374 487 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 CCL16O15467 120 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 GALR2O43603 387 aaPredicted RBP17.07■□□□□ 0.32
TPM1-211ENST00000558314 IGFBP6P24592 240 aaPredicted RBP17.07■□□□□ 0.32
TPM1-211ENST00000558314 CLCNKBP51801 687 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 NTHL1P78549 312 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 ELAVL2Q12926 359 aaKnown RBP17.07■□□□□ 0.32
TPM1-211ENST00000558314 RABEP1Q15276 862 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 IL17AQ16552 155 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 PPM1LQ5SGD2 360 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 GRASPQ7Z6J2 395 aaPredicted RBP17.07■□□□□ 0.32
TPM1-211ENST00000558314 IGSF22Q8N9C0 903 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 CDK5RAP3Q96JB5 506 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 CLSTN3Q9BQT9 956 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 TARS2Q9BW92 718 aaKnown RBP17.07■□□□□ 0.32
TPM1-211ENST00000558314 ZDHHC7Q9NXF8 308 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 IGSF9Q9P2J2 1179 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 CA14Q9ULX7 337 aa17.07■□□□□ 0.32
TPM1-211ENST00000558314 DENND4AQ7Z401 1863 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 ADAM12O43184 909 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 ZMYND10O75800 440 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 C8AP07357 584 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 FSHRP23945 695 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 GJB2P29033 226 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 MATR3P43243 847 aaKnown RBP eCLIP17.06■□□□□ 0.32
TPM1-211ENST00000558314 BRCC3P46736 316 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 LILRA6Q6PI73 481 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 CYP26C1Q6V0L0 522 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 KCNK18Q7Z418 384 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 LNX1Q8TBB1 728 aaPredicted RBP17.06■□□□□ 0.32
TPM1-211ENST00000558314 HDAC7Q8WUI4 952 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 PIK3R5Q8WYR1 880 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 DRC1Q96MC2 740 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 MRPL4Q9BYD3 311 aaKnown RBP17.06■□□□□ 0.32
TPM1-211ENST00000558314 CDT1Q9H211 546 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.06■□□□□ 0.32
TPM1-211ENST00000558314 DUSP12Q9UNI6 340 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 TNFSF13BQ9Y275 285 aa17.06■□□□□ 0.32
TPM1-211ENST00000558314 PHLPP2Q6ZVD8 1323 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 VWA3AA6NCI4 1184 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 LAD1O00515 517 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 OR1D2P34982 312 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 ARPP19P56211 112 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
TPM1-211ENST00000558314 NAB2Q15742 525 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 RINT1Q6NUQ1 792 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.05■□□□□ 0.32
TPM1-211ENST00000558314 DAW1Q8N136 415 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 SLC7A14Q8TBB6 771 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 ACO2Q99798 780 aaKnown RBP17.05■□□□□ 0.32
TPM1-211ENST00000558314 IRF2BPLQ9H1B7 796 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 UPF2Q9HAU5 1272 aaKnown RBP17.05■□□□□ 0.32
TPM1-211ENST00000558314 TOPORSQ9NS56 1045 aaPredicted RBP17.05■□□□□ 0.32
TPM1-211ENST00000558314 ANKFY1Q9P2R3 1169 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 FBXW11Q9UKB1 542 aa17.05■□□□□ 0.32
TPM1-211ENST00000558314 SMIM28A0A1B0GU29 152 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 PI15O43692 258 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 GFRA3O60609 400 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 TKTP29401 623 aaKnown RBP17.04■□□□□ 0.32
TPM1-211ENST00000558314 STRN3Q13033 797 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 DHX8Q14562 1220 aaKnown RBP17.04■□□□□ 0.32
TPM1-211ENST00000558314 SEZ6Q53EL9 994 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 RILPL1Q5EBL4 403 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 CWF19L1Q69YN2 538 aaKnown RBP17.04■□□□□ 0.32
TPM1-211ENST00000558314 DCLRE1AQ6PJP8 1040 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 SLC44A3Q8N4M1 653 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 TMX3Q96JJ7 454 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 PPP1R10Q96QC0 940 aaKnown RBP17.04■□□□□ 0.32
TPM1-211ENST00000558314 MMTAG2Q9BU76 263 aaKnown RBP17.04■□□□□ 0.32
TPM1-211ENST00000558314 EPS15L1Q9UBC2 864 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 CDY1Q9Y6F8 540 aa17.04■□□□□ 0.32
TPM1-211ENST00000558314 NPHP3-ACAD11A0A0J9YXS1 232 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 TRAPPC3O43617 180 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 LAMP2P13473 410 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 PRPHP41219 470 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 GRM5P41594 1212 aa17.03■□□□□ 0.32
TPM1-211ENST00000558314 SOX4Q06945 474 aaPredicted RBP17.03■□□□□ 0.32
TPM1-211ENST00000558314 AXDND1Q5T1B0 1012 aaPredicted RBP17.03■□□□□ 0.32
TPM1-211ENST00000558314 PDXDC1Q6P996 788 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms