RNA–Protein interactions for RNA: ENST00000558138.1

SPG11-207, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 750 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-207ENST00000558138 HSP90AA2PQ14568 343 aaPredicted RBP9.79□□□□□ -0.84
SPG11-207ENST00000558138 POSTNQ15063 836 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 LLGL2Q6P1M3 1020 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 ARMCX5Q6P1M9 558 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 DDX53Q86TM3 631 aaKnown RBP9.79□□□□□ -0.84
SPG11-207ENST00000558138 TMEM173Q86WV6 379 aaPredicted RBP9.79□□□□□ -0.84
SPG11-207ENST00000558138 CEP57Q86XR8 500 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 NELFCDQ8IXH7 590 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 HPS3Q969F9 1004 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 KIF12Q96FN5 646 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 PAGE5Q96GU1 130 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 SNX27Q96L92 541 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 GOLPH3LQ9H4A5 285 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 ST6GALNAC4Q9H4F1 302 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 PTPRHQ9HD43 1115 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 SLC39A2Q9NP94 309 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 CACNG4Q9UBN1 327 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 AGO2Q9UKV8 859 aaKnown RBP9.79□□□□□ -0.84
SPG11-207ENST00000558138 COG5Q9UP83 839 aa9.79□□□□□ -0.84
SPG11-207ENST00000558138 PRRC2BQ5JSZ5 2229 aaKnown RBP9.79□□□□□ -0.84
SPG11-207ENST00000558138 CHD9Q3L8U1 2897 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 PVALEFA0A1B0GWK0 134 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 FSD2A1L4K1 749 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 FRMD3A2A2Y4 597 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 TISP43B9A030 160 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 PTGESO14684 152 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 ACTN4O43707 911 aaKnown RBP9.78□□□□□ -0.84
SPG11-207ENST00000558138 CLSTN1O94985 981 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 ZNF202O95125 648 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 PIGRP01833 764 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 MYL1P05976 194 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 KCNA5P22460 613 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 TNFSF9P41273 254 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 ACOT2P49753 483 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 CASP5P51878 434 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 ERVFC1P60507 584 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 MRPS5P82675 430 aaKnown RBP9.78□□□□□ -0.84
SPG11-207ENST00000558138 SPAG1Q07617 926 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 KANK3Q6NY19 840 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 FUT10Q6P4F1 479 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 CNNM4Q6P4Q7 775 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 KRBA2Q6ZNG9 492 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 HS2ST1Q7LGA3 356 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 ADGRD2Q7Z7M1 963 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 AUTS2Q8WXX7 1259 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 SAAL1Q96ER3 474 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 UROC1Q96N76 676 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 FIZ1Q96SL8 496 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 FAM213AQ9BRX8 229 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 EMILIN2Q9BXX0 1053 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 PCIF1Q9H4Z3 704 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 GOLGA2P5Q9HBQ8 144 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 MRPL17Q9NRX2 175 aaKnown RBP9.78□□□□□ -0.84
SPG11-207ENST00000558138 ADAM28Q9UKQ2 775 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 HPSEQ9Y251 543 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 SSX2IPQ9Y2D8 614 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 R3HCC1Q9Y3T6 440 aaKnown RBP9.78□□□□□ -0.84
SPG11-207ENST00000558138 NUB1Q9Y5A7 615 aa9.78□□□□□ -0.84
SPG11-207ENST00000558138 SF3B1O75533 1304 aaKnown RBP eCLIP9.78□□□□□ -0.84
SPG11-207ENST00000558138 CITO14578 2027 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 A0A0B4J269 797 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 SMIM28A0A1B0GU29 152 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 GOLGA8IPA6NC78 632 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 GOLGA8JA6NMD2 632 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 ANKRD63C9JTQ0 380 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 H3BQ06 376 aaPredicted RBP9.77□□□□□ -0.85
SPG11-207ENST00000558138 PODXLO00592 558 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 INPPL1O15357 1258 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 EIF3DO15371 548 aaKnown RBP eCLIP9.77□□□□□ -0.85
SPG11-207ENST00000558138 B4GALT3O60512 393 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 KINO60870 393 aaKnown RBP9.77□□□□□ -0.85
SPG11-207ENST00000558138 B3GAT3O94766 335 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 KIF20AO95235 890 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 KIF4AO95239 1232 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 LDHAP00338 332 aaKnown RBP9.77□□□□□ -0.85
SPG11-207ENST00000558138 SOD2P04179 222 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 RPN1P04843 607 aaKnown RBP9.77□□□□□ -0.85
SPG11-207ENST00000558138 CTSAP10619 480 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 KLRC2P26717 231 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 MCM4P33991 863 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 GTF2F1P35269 517 aaKnown RBP eCLIP9.77□□□□□ -0.85
SPG11-207ENST00000558138 GLUD2P49448 558 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 CLCNKBP51801 687 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 DSC1Q08554 894 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 KCNA1Q09470 495 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 HYAL1Q12794 435 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 ELAVL2Q12926 359 aaKnown RBP9.77□□□□□ -0.85
SPG11-207ENST00000558138 CLUL1Q15846 466 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 KMT5BQ4FZB7 885 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 GLYCTKQ8IVS8 523 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 CD302Q8IX05 232 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 GSTCDQ8NEC7 633 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 BEST2Q8NFU1 509 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 BCL7CQ8WUZ0 217 aaPredicted RBP9.77□□□□□ -0.85
SPG11-207ENST00000558138 CDCA3Q99618 268 aaPredicted RBP9.77□□□□□ -0.85
SPG11-207ENST00000558138 HERC2P3Q9BVR0 1158 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 FGFBP2Q9BYJ0 223 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 ZBP1Q9H171 429 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 IKZF4Q9H2S9 585 aa9.77□□□□□ -0.85
SPG11-207ENST00000558138 UBE2ZQ9H832 354 aaPredicted RBP9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms