RNA–Protein interactions for RNA: ENST00000557694.1

LGMN-218, Transcript of legumain, humanhuman

TSL 2

Gene LGMN, Length 949 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGMN-218ENST00000557694 TNFSF13BQ9Y275 285 aa16.96■□□□□ 0.31
LGMN-218ENST00000557694 CACNA1HO95180 2353 aa16.96■□□□□ 0.31
LGMN-218ENST00000557694 MYH11P35749 1972 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 PIEZO1Q92508 2521 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 TADA2AO75478 443 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 GLUD1P00367 558 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 MUTP22033 750 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 TKTP29401 623 aaKnown RBP16.95■□□□□ 0.3
LGMN-218ENST00000557694 PRPHP41219 470 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 USP41Q3LFD5 358 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 TMEM119Q4V9L6 283 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 XKR4Q5GH76 650 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 HAUS3Q68CZ6 603 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 CWF19L1Q69YN2 538 aaKnown RBP16.95■□□□□ 0.3
LGMN-218ENST00000557694 CEP57Q86XR8 500 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 C2orf40Q9H1Z8 148 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 BLOC1S4Q9NUP1 217 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 USP34Q70CQ2 3546 aa16.95■□□□□ 0.3
LGMN-218ENST00000557694 PDCD11Q14690 1871 aaKnown RBP16.95■□□□□ 0.3
LGMN-218ENST00000557694 SMIM28A0A1B0GU29 152 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 THP07101 528 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 ADH1AP07327 375 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 MRE11P49959 708 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 SPAG1Q07617 926 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 NCBP1Q09161 790 aaKnown RBP16.94■□□□□ 0.3
LGMN-218ENST00000557694 DTHD1Q6ZMT9 781 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 PPFIBP1Q86W92 1011 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 TMEM87AQ8NBN3 555 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 TMEM161BQ8NDZ6 487 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 CMASQ8NFW8 434 aaPredicted RBP16.94■□□□□ 0.3
LGMN-218ENST00000557694 SMG7Q92540 1137 aaKnown RBP16.94■□□□□ 0.3
LGMN-218ENST00000557694 MFSD14AQ96MC6 490 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 KCNK12Q9HB15 430 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 WDR6Q9NNW5 1121 aaKnown RBP16.94■□□□□ 0.3
LGMN-218ENST00000557694 HCFC1R1Q9NWW0 138 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 NR2E1Q9Y466 385 aa16.94■□□□□ 0.3
LGMN-218ENST00000557694 MYO15AQ9UKN7 3530 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 ZMYM2Q9UBW7 1377 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 DMDP11532 3685 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 K7ERI5 159 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 HARSP12081 509 aaKnown RBP16.93■□□□□ 0.3
LGMN-218ENST00000557694 GUCY2FP51841 1108 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 UPP1Q16831 310 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 TMEM132AQ24JP5 1023 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 SPECC1Q5M775 1068 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 SCARA3Q6AZY7 606 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 SYT2Q8N9I0 419 aaPredicted RBP16.93■□□□□ 0.3
LGMN-218ENST00000557694 PIK3R5Q8WYR1 880 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 KIFAP3Q92845 792 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 DDX27Q96GQ7 796 aaKnown RBP16.93■□□□□ 0.3
LGMN-218ENST00000557694 FNIP2Q9P278 1114 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 FBXW11Q9UKB1 542 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 DNM3Q9UQ16 869 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 USTQ9Y2C2 406 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 CLUHO75153 1309 aa16.93■□□□□ 0.3
LGMN-218ENST00000557694 CITO14578 2027 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 KRBA1A5PL33 1030 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 TISP43B9A030 160 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 ZMYND10O75800 440 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 FGFR3P22607 806 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 TNFSF9P41273 254 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 GRM5P41594 1212 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 BMS1Q14692 1282 aaKnown RBP16.92■□□□□ 0.3
LGMN-218ENST00000557694 PSMD5Q16401 504 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 SLC10A6Q3KNW5 377 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 ZNF568Q3ZCX4 644 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 KRT79Q5XKE5 535 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 SLC39A4Q6P5W5 647 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 C15orf39Q6ZRI6 1047 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 CCDC149Q6ZUS6 474 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 SNX27Q96L92 541 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 IFT74Q96LB3 600 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 FIZ1Q96SL8 496 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 TTPALQ9BTX7 342 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 TMEM134Q9H6X4 195 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 KMT5AQ9NQR1 393 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 PHLPP2Q6ZVD8 1323 aa16.92■□□□□ 0.3
LGMN-218ENST00000557694 H0Y858 1186 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 PPEF2O14830 753 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 CCL16O15467 120 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 PLA2G4BP0C869 781 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 MAPTP10636 758 aaKnown RBP16.91■□□□□ 0.3
LGMN-218ENST00000557694 GUCY2CP25092 1073 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 OR1D2P34982 312 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 MTMR3Q13615 1198 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 DHX8Q14562 1220 aaKnown RBP16.91■□□□□ 0.3
LGMN-218ENST00000557694 MCM6Q14566 821 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 KARSQ15046 597 aaKnown RBP16.91■□□□□ 0.3
LGMN-218ENST00000557694 PPP2R5AQ15172 486 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 GRASPQ7Z6J2 395 aaPredicted RBP16.91■□□□□ 0.3
LGMN-218ENST00000557694 ITFG1Q8TB96 612 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 NTPCRQ9BSD7 190 aaKnown RBP16.91■□□□□ 0.3
LGMN-218ENST00000557694 PRKD2Q9BZL6 878 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 TUBGCP4Q9UGJ1 667 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 CLIC4Q9Y696 253 aa16.91■□□□□ 0.3
LGMN-218ENST00000557694 SF3B1O75533 1304 aaKnown RBP eCLIP16.91■□□□□ 0.31e-7■■■■■ 172.3
LGMN-218ENST00000557694 VPS13AQ96RL7 3174 aa16.9■□□□□ 0.3
LGMN-218ENST00000557694 SPDYE4A6NLX3 237 aa16.9■□□□□ 0.3
LGMN-218ENST00000557694 FAM189A1O60320 539 aa16.9■□□□□ 0.3
LGMN-218ENST00000557694 B3GAT3O94766 335 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms