RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 GFPT1Q06210 699 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-233ENST00000557529 CACNB2Q08289 660 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-233ENST00000557529 BIRC3Q13489 604 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 BMS1Q14692 1282 aaKnown RBP13.47□□□□□ -0.25
SHMT2-233ENST00000557529 ARHGEF6Q15052 776 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 ARHGAP44Q17R89 818 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 GNASQ5JWF2 1037 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 ZNF569Q5MCW4 686 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 TDRD10Q5VZ19 366 aaKnown RBP13.47□□□□□ -0.25
SHMT2-233ENST00000557529 EEF1DP3Q658K8 133 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 ZNF571Q7Z3V5 609 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-233ENST00000557529 GPIHBP1Q8IV16 184 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 PPM1KQ8N3J5 372 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 NME8Q8N427 588 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 ATRIPQ8WXE1 791 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 WDR24Q96S15 920 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 PPP1R16BQ96T49 567 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 CDT1Q9H211 546 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 PDZD7Q9H5P4 517 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 C1orf112Q9NSG2 853 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 GUCA1BQ9UMX6 200 aa13.47□□□□□ -0.25
SHMT2-233ENST00000557529 A0A087X0T9 212 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 FOXN3O00409 490 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-233ENST00000557529 TSPAN1O60635 241 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 PHACTR2O75167 634 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 HLA-DRAP01903 254 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 HMGCRP04035 888 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 FAM228BP0C875 321 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 ARF4P18085 180 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-233ENST00000557529 TNFSF9P41273 254 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 PIK3CAP42336 1068 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 WNT7BP56706 349 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 IRX5P78411 483 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-233ENST00000557529 SEZ6Q53EL9 994 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 SMYD5Q6GMV2 418 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 TAF2Q6P1X5 1199 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 THNSL1Q8IYQ7 743 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 MYRIPQ8NFW9 859 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 HELQQ8TDG4 1101 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 SHC3Q92529 594 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 ADPGKQ9BRR6 497 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 LACRTQ9GZZ8 138 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 RPF1Q9H9Y2 349 aaKnown RBP13.46□□□□□ -0.25
SHMT2-233ENST00000557529 HDAC6Q9UBN7 1215 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 ADAMTS1Q9UHI8 967 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 KAT6AQ92794 2004 aa13.46□□□□□ -0.25
SHMT2-233ENST00000557529 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 RCCD1A6NED2 376 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 RIOK3O14730 519 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 B4GALT4O60513 344 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 LRRN2O75325 713 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 GPR32O75388 356 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 PRKAR2AP13861 404 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 TUBB2AQ13885 445 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 NAB2Q15742 525 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 DUOXA2Q1HG44 320 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 KIZQ2M2Z5 673 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 DCAF4L1Q3SXM0 396 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 LMBRD2Q68DH5 695 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 RUFY4Q6ZNE9 571 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 FAM71AQ8IYT1 594 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 ZNF784Q8NCA9 323 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 CD99L2Q8TCZ2 262 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 SECISBP2LQ93073 1101 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 ERO1AQ96HE7 468 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 KREMEN1Q96MU8 473 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 TUBB2BQ9BVA1 445 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 IRX2Q9BZI1 471 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 IMPG2Q9BZV3 1241 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 L2HGDHQ9H9P8 463 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 XPNPEP3Q9NQH7 507 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 PTPRJQ12913 1337 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 CTAGE9A4FU28 777 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 MYADML2A6NDP7 307 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 GPR25O00155 361 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 TREHO43280 583 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 ADAMTS4O75173 837 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 TACC1O75410 805 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 CSDE1O75534 798 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 VNN1O95497 513 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 TNNC2P02585 160 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 RPLP2P05387 115 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 PNMA6AP0CW24 399 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 DARSP14868 501 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 TBXAS1P24557 533 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 YY1P25490 414 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 CST5P28325 142 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 AXLP30530 894 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 VEGFBP49765 207 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 TRIM32Q13049 653 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 NCOA4Q13772 614 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 ALKBH5Q6P6C2 394 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 CATSPER4Q7RTX7 472 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 SLC35F6Q8N357 371 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 RNF10Q8N5U6 811 aaKnown RBP13.45□□□□□ -0.26
SHMT2-233ENST00000557529 OR5B17Q8NGF7 314 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 PXYLP1Q8TE99 480 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 DNAJB3Q8WWF6 145 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 FAM212AQ96EL1 285 aa13.45□□□□□ -0.26
SHMT2-233ENST00000557529 ANKRD36BP1Q96IX9 119 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms